Gene Lferr_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2478 
Symbol 
ID6878476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2443637 
End bp2444350 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID642790335 
Productarsenical resistance protein ArsH 
Protein accessionYP_002220880 
Protein GI198284559 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR02690] arsenical resistance protein ArsH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGAA ATTTGCCCAA TACCGACGAT GTGCTGCTGC AGGTGCCGGA TGTCCGGTGT 
TTGCGCAGTG CCGCCGAAAC GGATCACCCG CCGCGCATCC TGCTGCTGTA CGGCTCCAAC
CGGGAATGTT CCTACAGTCG CCTGCTGACG CTGGAGGCGG AACGTCTGCT GCGATACTTC
GGCGCGGAAA CCCGCGTCTT TCACCCGACG GGACTACCCC TGCCCGACGA TGCCCCGGTG
ACACATCCCA AAGTGGTGGA GTTGCAGGAG TTGGTAGAAT GGTCGGAAGG ACAGGTCTGG
TGTTCTCCGG AGCGTCATGG CGCCATGACG GGGGTGTTCA AATCGCAGGT GGACTGGATT
CCCCTCAATT CTGGGGCAAT TCGCCCTACC CAGGGCAAAA CGCTGGCGTT AATGCAGGTT
TGCGGAGGGT CGCAATCGTT CAATGCGGTC AACCAGATGC GCATTCTGGG CCGCTGGCTG
CGCATGCTCA CCATCCCCAA CCAGTCCTCC GTTCCCAAGG CTTTTCTGGA GTTTGACGAT
GGTGGCCGGA TGAAGCCTTC TGCCTACTAC GACCGGGTCG TGGACGTCAT GGAAGAACTC
ATGAAATTCA CCCTGCTTAC CCGCGGGAAC AGCGATTATC TGGTGGATCG CTATTCCGAG
CGCAAAGAAT CCGCAGAGGA ACTTTCCCGG CGCGTCAATC TACAGAACCT ATAG
 
Protein sequence
MSGNLPNTDD VLLQVPDVRC LRSAAETDHP PRILLLYGSN RECSYSRLLT LEAERLLRYF 
GAETRVFHPT GLPLPDDAPV THPKVVELQE LVEWSEGQVW CSPERHGAMT GVFKSQVDWI
PLNSGAIRPT QGKTLALMQV CGGSQSFNAV NQMRILGRWL RMLTIPNQSS VPKAFLEFDD
GGRMKPSAYY DRVVDVMEEL MKFTLLTRGN SDYLVDRYSE RKESAEELSR RVNLQNL