Gene Lferr_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2466 
Symbol 
ID6878464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2431362 
End bp2431832 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID642790323 
Productsingle-strand binding protein 
Protein accessionYP_002220868 
Protein GI198284547 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.34674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAG TGAACAAGGT CATATTGTTG GGGCATCTGG GACGGGACCC GGAGATGCGT 
TATCAGCCCA GTGGCGGCGC CATCGCGAAC TTCAGCATCG CGACTTCCGA GACCTTCAAG
GACAAGGAAG GCAACAAGCA GGAGCGCACC GAATGGCATC GCGTCGTGCT CTTCGGACGC
ACTGCGGAAA TCGCCGGCGA ATATCTGCGC AAGGGCAGCA TGGCCTATGT GGAAGGCCGC
CTGCAGACGC GCAAGTGGAC CGACAAGGAA GGGCAGGAGC GTTACACCAC GGAGATCGTG
GGAGACCGTC TGCAACTGGT GGGCGCGCGT GGGGGCGGTG GCGGCGGCGC GGCCAGCTTC
GATGAGGAAG ATCCGTCCCG GCCGAGTGGC GGCAGCAGTG CCGGGGGCGC GCGGAAAAAT
GAGATGCCGC CCGCGCCGGC GGAGGATTTT GATGATGATA TTCCGTTCTG A
 
Protein sequence
MAGVNKVILL GHLGRDPEMR YQPSGGAIAN FSIATSETFK DKEGNKQERT EWHRVVLFGR 
TAEIAGEYLR KGSMAYVEGR LQTRKWTDKE GQERYTTEIV GDRLQLVGAR GGGGGGAASF
DEEDPSRPSG GSSAGGARKN EMPPAPAEDF DDDIPF