| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2451 |
|---|
| Symbol | |
|---|
| ID | 6878449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2413589 |
|---|
| End bp | 2414422 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002220853 |
|---|
| Protein GI | 198284532 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.111261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.370864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAG AAATAGCCAC TGCCTTGCAG AATGTGCTGG TTTTCGACAT CGAGACGGTG
CCCGACGTTG CCGGCGGGCG GCGGACGCAT GGCATTGAAC TGGCGGACGA CGCGGGCGTG
GCGGAATTGC TGCAGCACCA GCGTCGCATC GAAACCCAGG GCGCAACGGA GTTTCTGCGC
CCCTATCTGC ACCGGGTAGT CGCTATTTCC GCCCTCTGGT GGCAGGGCGG ACAGGTCAAG
CTCAGCAGTT TCGGCAAGGT GGACGACGAC GAGGCCGCTC TGGTCACGGC CTTTTTCCAG
TTCATTCAGC GCCATGCCCC GCAACTGGTA TCCTGGAATG GCGCGGCCTT TGACCTCCCG
GTGCTGCATT ATCGGGCCCT GCTCCACGGC ATTCCTGCCG CCCGCTACTG GGAGCACGGC
GAACAGGACC AGAACTATCG CTGGAACAAT TACACCAGCC GTTACCACGA GCGCCATCTC
GACCTCATGG ATGTCCTCTC CGCCTATCAG GCGCGCAATG TCGCCCGTCT CCAGGACATC
GCGTTGCTGC TGGGGCTGCC CGGCAAGCTG GGAATGAGCG GTGCGGAGGT CTGGACCCAT
TATCAGGCAG GGGAGCTGGC GGGCATTCGC CACTACTGCG AAGTCGATGT GCTCAACACG
GCCCTGGTCC ACCTGCGTTT TGAACTGACC CGCGGGCATC TCGACAGATC GGCTTATGAT
GTTTGCCAGA CCCGGTTGCG GTCTTACCTG CAAGGCCGGG ACGAGGCCCA CGTCCAGGAA
TTTCTCACCC TGTGGCCAGA GAATCTGCAT GTCGCGTCCC AAGCCCATTC ATAA
|
|---|
| Protein sequence | MAEEIATALQ NVLVFDIETV PDVAGGRRTH GIELADDAGV AELLQHQRRI ETQGATEFLR
PYLHRVVAIS ALWWQGGQVK LSSFGKVDDD EAALVTAFFQ FIQRHAPQLV SWNGAAFDLP
VLHYRALLHG IPAARYWEHG EQDQNYRWNN YTSRYHERHL DLMDVLSAYQ ARNVARLQDI
ALLLGLPGKL GMSGAEVWTH YQAGELAGIR HYCEVDVLNT ALVHLRFELT RGHLDRSAYD
VCQTRLRSYL QGRDEAHVQE FLTLWPENLH VASQAHS
|
|---|
| |