| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2450 |
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| Symbol | |
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| ID | 6878448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2412292 |
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| End bp | 2413614 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790307 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_002220852 |
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| Protein GI | 198284531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.211683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.124468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTC CCAAGCCCAT TCATAACGCT CAGCCTGAGC AAGTGTTCAT CGAAAGTCTG
GATACCGAGG GACGCGGAAT TGCCCGTGTG GAGGGCAAGG TACTGTTTGT CGATGGGGCG
CTGCCCGGCG AGCGGGTCTG GGCACGGCGT ACCCAGAACC ACAAGAGCTT CGATCGTGCC
GAGTTGCTGC AGGTGGACAA GGCGTCCTCC CTGCGGGTGT CGCCGCCTTG TCCTCACTTT
GGTGTCTGCG GGGGTTGCAG CCTGCAGCAT CTGGAACCGG CGGCGCAGGT GGCCATCAAG
CAAAGACAGC TGGAAGATCA TCTCTGGCGC ATCGGCAAGG TCCGCCCCGA ACGCGTCCTG
CCACCCATTC ATGGCCCGAG CCTGGGCTAT CGCAGCAAGG CACGGCTCTC GGTGCGCACG
CCGAAAACCC GGGGTGCCAT GGTGGGTTTT CGCGAACGCA ACAGCAGTTA TGTCGTGGAT
ATGGGGCAAT GTCTGACCCT CGACCCCCGC GTCGGGCAAC GCATTCTGTC CCTGCGGACG
CTGATCGGGC AGATGCAATC GCCCCAGGAT TTCCCGCAGA TCGAAGTGGC GGCCACGCCG
GATGCCGTCG CGCTGGTGTT TCGTCACATG CGGCCGCTGG CGGAAAGTGA TCTGCAGCAC
CTGCGTGCTT TTGGTGAGCA ACACGACCTG CAGATATGGT TGCAACCGCG CGGGCCCGAG
ACCCTGTATC CCTTGTGGCC GGAGCAGCCG GAGCCTCTCC ATTACGACCT GCCGGATTAT
CGGTTGCGCC TGCGTTTTGA TCCCCTGGTC TTCACTCAGG TCAATCAGGC GGCGAATCAG
GTGATGGTGC GCCGCGCCAT GGCGTTGCTG CAACCACAAC CGGGGGAGCA CATTCTGGAC
CTCTTCTGTG GGCTCGGGAA TTTTACCCTG CCCATCGCCC GACTGGGAGC GCAGGTGCTT
GGCATCGAAG GGGATGCCCG GCTGGTCGCG CTGGCTGCGG AGAATGCCGC CGCCAACGGC
CTGGCGGATA AAGCCCGGTA TGCCGTAGCC GATCTCACCC AGGCCCGGAT GGAAGATTTT
GCTCCGGCGG GCGCCATCGA CAAAATGCTC ATCGATCCGC CCCGCAGTGG AGCCATCGAA
GTGTTGCGCA GTCTGACTCC CGGCGTCCGC CGTCTGGTGT ATGTCTCCTG CAATCCGGCG
ACCCTGGCCC GTGATGCCGA GTATCTGGTA CACGAGCGCG GCTATCGTTT GCGAGCGGCA
GGCGTCGTCA ACATGTTTCC CCATACTGCC CATGTCGAAT CCATTGCCCT CTTCGAACGC
TGA
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| Protein sequence | MSRPKPIHNA QPEQVFIESL DTEGRGIARV EGKVLFVDGA LPGERVWARR TQNHKSFDRA
ELLQVDKASS LRVSPPCPHF GVCGGCSLQH LEPAAQVAIK QRQLEDHLWR IGKVRPERVL
PPIHGPSLGY RSKARLSVRT PKTRGAMVGF RERNSSYVVD MGQCLTLDPR VGQRILSLRT
LIGQMQSPQD FPQIEVAATP DAVALVFRHM RPLAESDLQH LRAFGEQHDL QIWLQPRGPE
TLYPLWPEQP EPLHYDLPDY RLRLRFDPLV FTQVNQAANQ VMVRRAMALL QPQPGEHILD
LFCGLGNFTL PIARLGAQVL GIEGDARLVA LAAENAAANG LADKARYAVA DLTQARMEDF
APAGAIDKML IDPPRSGAIE VLRSLTPGVR RLVYVSCNPA TLARDAEYLV HERGYRLRAA
GVVNMFPHTA HVESIALFER
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