| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2449 |
|---|
| Symbol | |
|---|
| ID | 6878447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2411769 |
|---|
| End bp | 2412323 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642790306 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG family protein |
|---|
| Protein accession | YP_002220851 |
|---|
| Protein GI | 198284530 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.10712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATC CATTGCCCTC TTCGAACGCT GAGCGGCCCG CGCGCTGGCT CTGGGTGGAT
GTTTCCGCCC AACGCCTGCA TGAAATGCAC GGCGCCGAAT CGCGCGCCGA GTATGTCGTA
TCCACGGCCC GTAAGGGGCT GGGCGAAGAG ATCGACAGCG GATGCACACC GCGCGGCTGG
CACGTAGTGC GCGCGCGCAT CGGCGCCGGC CTGCCCGCGA CGGCCATTCT GCGCGGCCGG
CGCTGGACCG GTACCTGTTA CAGTGCGGAG TGGGCGGCCG GCCAGCCGCA TCGGGACTGG
ATTCTCGGGC GCATCCTCTG GCTCTCGGGC AGCGAAATGG GTTTTAATCG TGGTGGCCTT
CAGGATACCT TTCGCCGTTA TATCTACATC CATGGCACAG CCGATGTGGA CCATCTCGGT
CAACCGGTAT CTGCAGGCTG CGTGCGGATG GCGCCCGATG CGGTATGCGC CCTCTTCGCC
GAATGTGCCG TGAATACCCC CGTTTTTGTC GGCCTGCAGC CACCGCTGCA CTTCCCCCCG
CTGAGGATGT CCTGA
|
|---|
| Protein sequence | MSNPLPSSNA ERPARWLWVD VSAQRLHEMH GAESRAEYVV STARKGLGEE IDSGCTPRGW
HVVRARIGAG LPATAILRGR RWTGTCYSAE WAAGQPHRDW ILGRILWLSG SEMGFNRGGL
QDTFRRYIYI HGTADVDHLG QPVSAGCVRM APDAVCALFA ECAVNTPVFV GLQPPLHFPP
LRMS
|
|---|
| |