| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2446 |
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| Symbol | rpsF |
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| ID | 6878444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2408050 |
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| End bp | 2408454 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642790303 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_002220848 |
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| Protein GI | 198284527 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0045402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGCGTCATT ATGAAATTGT GTTTCTGGTC CATCCTGACC AGAGTGAACA GGTCCCCCAG
ATGATCGAGC GCTACCGCGG CATGATCGAG AGCGACGGCG GGCATTTTCA TCGCCTGGAG
GACTGGGGCC GCCGGCAACT GGCCTACCCC ATCAAGAAGG CCCACAAGGC ACACTATGTG
CTGATGAACA TAGAGTGCAG CAGTGTTGCG CTGGCTGAAC TGGAAGACGC TTTCCGCTTC
AACGACGCGG TATTGCGCCA TCTGATACTG GCCCGCGATG AAGCCGTCAC CAGTCCTTCC
TTCCTGGCCC GCGATGAGAC TGACCGTCGG GAACGCAGCG AAGAGACCGC CGAAGGCGAA
GGCGAACCGG ATCACAGCGC TAACGAAGCC GTAGTGACGG CTTAA
|
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| Protein sequence | MRHYEIVFLV HPDQSEQVPQ MIERYRGMIE SDGGHFHRLE DWGRRQLAYP IKKAHKAHYV
LMNIECSSVA LAELEDAFRF NDAVLRHLIL ARDEAVTSPS FLARDETDRR ERSEETAEGE
GEPDHSANEA VVTA
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