Gene Lferr_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2442 
Symbol 
ID6878440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2404953 
End bp2406326 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content63% 
IMG OID642790299 
Productreplicative DNA helicase 
Protein accessionYP_002220844 
Protein GI198284523 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000892281 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTGATT CGGCAGACTA CGGCGGCGGG GTCAAGGCCC CGCCGCACTC TATTGAGGCG 
GAGCAATCCG TCATCGGCGC CCTGCTGATC GACCCCGAGA CGGCGGAGCA GGTCACTGAG
GCGGTGACGG CCGAAGATTT TTATGAGCGT CGCCACCGCC AGATTTTCCA GGCTATCAGC
GCCATGCTGG GCGCCGGGCG GGCGGTGGAC GCCATCACGG TCTCCGAGTG GTTGCAGGAT
CATGAGCAGC TCGCCGATGT GGGCGGGGTG CAGTATCTCC TCATGCTGGC CAACGAGACA
CCCTCGGCGG CCAATGTGCT CGCCTATGCG CGGATCGTGC GGGAGCGGGC CACCCTGCGT
GACCTCATTC GGGTCGGTCG GGAAATTGCC GAGCTTGCCT ACCGCCCGGA AGGGCGGCAG
GCTCAGGCCT TGTTGGACGA GGCCGAAAGC CGGGTCTTTC ATCTCGCCGA AGGACAGCAG
CGAGCCGGTG AAGGCTTCCA GCAACTCAAG GATGCACTTC CGGCGGTTAT CGACCGGATC
GAGACCATCG CCCGCGAGAG GAAGGGCGTC ACGGGGCTGT CCACGGGCTT TGCCGATCTG
GACGAGAAAA CCTCCGGCCT CCACCCGGGC CAGCTCGTTA TTGTCGCGGG CCGTCCGAGT
ATGGGAAAAA CCTCTTTCGC CATGAATATA GCGGAGCATG TCGCCTGTAT CGAAGGCAAG
CCTGTCGCGG TCTTCAGCAT GGAAATGCCG ACCGACGAGA TCGTCCTGCG CGCGCTCTCG
TCGCGGGGGC GGGTGGATCA GCACCGCCTG CGCAATGGCA GCCTGGGTAA TGACGATTGG
CCGCGCATCG CCCACGCCAT CGGTGAGCTC GGCAACGCGC CCCTGTTCGC CGACGATTCT
GCCGCGCTGA CCCCGACGGA TTTGCGCTCG CGGGCGCGTC GGTTGAAGCG GGAGCATGGC
CTGGCTTTGA TCGTGGTGGA CTATCTGCAA CTCATGCAGG TGCCGGGACG GGGTGATAAC
CGGGTCGCCG AGATTTCCGA GATCAGCCGC TCGCTCAAGG CGTTGGCCAA AGAGCTGTCG
ATCCCGGTCA TTGCCCTCTC CCAGCTCAAC CGAAGTCTGG AAAATCGTAC CGAGAAGCGT
CCGCAGATGT CCGATCTGCG CGAATCCGGC GCCATTGAAC AGGATGCCGA CCTGATCCTC
TTCCTCTATC GCGATGAGGT GTATTACAAG GACAAGGAAG AGGTGAAGGG CATTGCCGAG
GTGATCATCG GTAAACAGCG CAACGGACCC ATCGGGACGG TTCGGATGAG TTTCTTCGGT
GAATATACCC GTTTTGAGAA TTATGCGCCG TCCGGGGATG GCTTCGGGCA TTAG
 
Protein sequence
MSDSADYGGG VKAPPHSIEA EQSVIGALLI DPETAEQVTE AVTAEDFYER RHRQIFQAIS 
AMLGAGRAVD AITVSEWLQD HEQLADVGGV QYLLMLANET PSAANVLAYA RIVRERATLR
DLIRVGREIA ELAYRPEGRQ AQALLDEAES RVFHLAEGQQ RAGEGFQQLK DALPAVIDRI
ETIARERKGV TGLSTGFADL DEKTSGLHPG QLVIVAGRPS MGKTSFAMNI AEHVACIEGK
PVAVFSMEMP TDEIVLRALS SRGRVDQHRL RNGSLGNDDW PRIAHAIGEL GNAPLFADDS
AALTPTDLRS RARRLKREHG LALIVVDYLQ LMQVPGRGDN RVAEISEISR SLKALAKELS
IPVIALSQLN RSLENRTEKR PQMSDLRESG AIEQDADLIL FLYRDEVYYK DKEEVKGIAE
VIIGKQRNGP IGTVRMSFFG EYTRFENYAP SGDGFGH