Gene Lferr_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2428 
Symbol 
ID6878426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2395235 
End bp2395564 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content44% 
IMG OID642790286 
Productsmall multidrug resistance protein 
Protein accessionYP_002220831 
Protein GI198284510 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0107845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000083233 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATGGT TATATTTGGC AATAGCGATC GTTTCCGAAG TCATTGCAAC TTCGGCGCTC 
AAGGCAACAG ATGGCTTTAC GCGTTGGAGC CCGATTCTTC TTGTTATTGT GGGGTATATG
CTGGCATTCT ATTTGCTTTC TCTTTCACTT CGTTCTATTG ACCTTGGTGT TGCCTATGCT
ATCTGGTCTG GAGTAGGAGT AGCCTTAATC GTACTTGTTG GTTGGGTCAT TTATCGTCAG
CCGCTAAATA TGGCTTCTTT CATTGGTATA GCGCTCATCG TTTCTGGCGT AATAGTGCTC
CATCTTTTTT CAAAATCGAC AGCGCATTGA
 
Protein sequence
MQWLYLAIAI VSEVIATSAL KATDGFTRWS PILLVIVGYM LAFYLLSLSL RSIDLGVAYA 
IWSGVGVALI VLVGWVIYRQ PLNMASFIGI ALIVSGVIVL HLFSKSTAH