Gene Lferr_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2422 
Symbol 
ID6878420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2389672 
End bp2390208 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID642790280 
Productmethylated-DNA/protein-cysteine methyltransferase 
Protein accessionYP_002220825 
Protein GI198284504 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0173475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTATC CGATGCCGAA TGAGCCGCTT CGTCTTCAAA TGGAGCATGT AGCAACCCCG 
TTGGGGACCA TGTTGCTCGT CACCGATACG CAAGGTCGGC TCCGCGCGCT GGATTGGGCG
GACAGCGAGG GCCGGATGCG GAGGTTGTTG CAACTGCACT ATGGTCGACA GGGCTTTGAT
CTGAGAATGG GTGCTGTTCA AAAACATATT CATGGCTGCC TTGATGCCTA CTGGAGTGGT
GACCTGGGTG CGCTCAATGC GGTTCCGGTG AAAACGGGCG GCACAGCATT TCAGCAATCC
GTTTGGACCT TTTTGCGCAC GATTTCTGCA GGGCATACGC GCAGCTATCA AGAACAGGCC
AGGGCCATAG GGCGAGGCTC CGCTGTTCGG GCCGTTGCCG GTGCAAATGG GGCGAATCCC
GTGGGTATCG TCGTTCCCTG CCATAGGGTC ATAGGTTCAG ACGGTTCGCT GACGGGATAT
GCCGGGGGTA TAGAGCGTAA ACGCTGGCTA TTGAGGCACG AGGGCGGCAA CTTTTAG
 
Protein sequence
MGYPMPNEPL RLQMEHVATP LGTMLLVTDT QGRLRALDWA DSEGRMRRLL QLHYGRQGFD 
LRMGAVQKHI HGCLDAYWSG DLGALNAVPV KTGGTAFQQS VWTFLRTISA GHTRSYQEQA
RAIGRGSAVR AVAGANGANP VGIVVPCHRV IGSDGSLTGY AGGIERKRWL LRHEGGNF