| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2415 |
|---|
| Symbol | |
|---|
| ID | 6878413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2383643 |
|---|
| End bp | 2384899 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642790273 |
|---|
| Product | restriction modification system DNA specificity domain |
|---|
| Protein accession | YP_002220818 |
|---|
| Protein GI | 198284497 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.589349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.260014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG AGTGGAAAGA ATGCTCGCTT GGTGATGTTA TCGAACTGAA GCGTGGCTAC
GACCTACCGC AAAAAGAACG TTTATCTGGT GATGTTCCGC TGGTCTCATC TTCCGGTGTC
ACGGACACCC ACGCAAAAGC AATGGTCAAG GGACCGGGGG TTGTGACTGG ACGATACGGA
ACATTAGGAC AAGTATTTTA CGTTAGGCAG AATTTTTGGC CGCTCAACAC CACGCTTTAC
GTGTACGACT TCAAAGGCAA CGACCCACGT TTCATAAGTT ATTTTCTACG CGAGGTTGAC
TTTCTCGTCT ATTCAGACAA GGCGGCTGTT CCCGGCTTGA ATCGCAACCA CCTACATCAG
GCGAGGGTTC GGATTCCAAC CGATCCCACC GAACAACGCC GCATCGCCCA CATTCTCGGC
ACCCTGGACG ACAAAATCGA GAACAACCGC AAGACGGCGA AAACCCTGGA AGCCATGGCA
CAGGCCATCT TCCAGTCGTG GTTCGTGGAC TTCGACCCGG TACGCGCCAA GATGGCCGGG
GAATCCCCGG AAAGTATCTG CAAGCGGCTG AAGCTCACGC CCGAGATTCT GGACCTGTTC
CCGGATAAGC TGGTGGACTC GGAATTGGGG GAAATTCCTG AGGGGTGGGT GGTTAGGTCA
TTAGATAACA TAGGGAACTT CCTGAATGGC TTGGCGCTGC AGAAATTCCC ATCAAAAGGT
CAAGATGACG CCCTGCCTGT CATAAAAATT GCACAACTTA GGTCAGGTAA TCTCGGCGGT
GCTGATCAGG CAAGTTGTGA AATAGAACCA CAGTATATAG TGCATGATGG CGACATCTTA
TTTTCTTGGT CTGGCTCTCT TGAATGCGCT ATCTGGTCGG GGGGCACAGG GGCTCTCAAC
CAGCACCTTT TTAAAGTCAC ACCCAAATCA GATTATCCGC GTTGGTTGTG TTACTTCGGC
GTCCATCACT TTTTAGATTT CTTTCGGGAA ATAGCTGCTG GTAAGGCCAC AACAATGGGT
CATATTCAGC GACACCATTT ATCCGATTCA AAATTGCCTT TCCCATGCTC AGGCACTCTC
GATGTCATGA ATAAACCATT ATCGTCCATG TTTGAAGTTA TGTGGATGAA AACTGTTGAG
GAACAAAAGC TGGTTTTTTT ACGTGACACA CTTCTACCCA AACTCATATC CGGCGAAATC
CGCGTTTTAG ACGAACGCAC CATCGAAAAC GATAGGGCTT ATCCATGGAT AAAATAA
|
|---|
| Protein sequence | MANEWKECSL GDVIELKRGY DLPQKERLSG DVPLVSSSGV TDTHAKAMVK GPGVVTGRYG
TLGQVFYVRQ NFWPLNTTLY VYDFKGNDPR FISYFLREVD FLVYSDKAAV PGLNRNHLHQ
ARVRIPTDPT EQRRIAHILG TLDDKIENNR KTAKTLEAMA QAIFQSWFVD FDPVRAKMAG
ESPESICKRL KLTPEILDLF PDKLVDSELG EIPEGWVVRS LDNIGNFLNG LALQKFPSKG
QDDALPVIKI AQLRSGNLGG ADQASCEIEP QYIVHDGDIL FSWSGSLECA IWSGGTGALN
QHLFKVTPKS DYPRWLCYFG VHHFLDFFRE IAAGKATTMG HIQRHHLSDS KLPFPCSGTL
DVMNKPLSSM FEVMWMKTVE EQKLVFLRDT LLPKLISGEI RVLDERTIEN DRAYPWIK
|
|---|
| |