Gene Lferr_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2410 
Symbol 
ID6878408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2376276 
End bp2377430 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID642790268 
Producthypothetical protein 
Protein accessionYP_002220813 
Protein GI198284492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.576081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAT CTATCGCGTT CGCATTTGGC TTGCTATCCG GACTTTCCGG GTTAGCATAC 
GCAGATGGTT TCTCCATTCC ACCACCACTC AAATTTAATG CCGGCCCCCT AGGAGAACTT
GACGTCCAGG GTGTTGCCTC TGCTATGGGC TTTGCACAGA CCAACCCTGC TGGCACAGGC
CTCAACGGTA AAAACTTTGG TGCCGGGATA ACCAACGGTT TGATATCCAT CAGTAAGCCT
ACCGGCCTTA TACAGTTTTA TCTGACTGCC GGTGCCTACA ATTTTCCGAA CCTTGGGCAA
CCCTTCCATT CCGCAAGCAC TGCCTTGCAA GACTTTACTG CACTCCCGTC TGCCTATCTG
ACTATTGCGC CATTGAGTAA TTTTTCTGTT AGCATCGGAC AGCTTCCCAC ACTGATTGGC
TATACTGGAG TACTTGATTA TAACCGCATG AATATAGAGG GAGGATTTCC GTGGACTATT
CAACCGTCGT TTAGTCGCGG CATCCAGATC AACTATTCCT ATGGGCCGGT ATCTGCATCG
GTTTCTTGGA ATGACGGATA TTTTTCCAAT CGTTATAACG TAATATCAGG CTTGCTGACC
TATACGATCA ACCCGGAGAA CTCAGTTTCC CTCTACGCAG ATGGAAATAC AGGGCATACC
GGCACGATCA ATGATCTGAG CACGTTACGC TTCTCCAAAA ATGGTTATGT AGATAGCTCA
CTGGTATATG ACAATAGTAA TATTTATGGT CTTTACTACA CCTACAGTGG TTCGCATTTT
ACCATAACTC CGGAATTACA GTACATGTAC ACTCCGATCA ATCGGGCTTT TGGTACGACT
CAAAGTTCCA ACGATATCAG CGCGATGATC CACGCAGACT ACTATCTCAC CAAGAACTGG
TCTATCGCAG CCGGTGTCGA CTATGAACAC GCAAATTCAA CCGGTGAGGC TACGGCGGCG
ACGGGCGGCT ATTTTGGTTA CGGTGCAGGA TCCAGCGCTT TCGGAGTGAT GATCACACCA
ACTTATGTAG ATAACGAGTA TTTTATACGG GATGAACTCT CTTATGTTCA CCTCACCAAC
TATTCCTCTG GTTTCGGCGC TGGTAATAGG CCTGATCAGT TCAGAGATAT TCTAGAAACC
GGGATTTGGT TCTGA
 
Protein sequence
MSKSIAFAFG LLSGLSGLAY ADGFSIPPPL KFNAGPLGEL DVQGVASAMG FAQTNPAGTG 
LNGKNFGAGI TNGLISISKP TGLIQFYLTA GAYNFPNLGQ PFHSASTALQ DFTALPSAYL
TIAPLSNFSV SIGQLPTLIG YTGVLDYNRM NIEGGFPWTI QPSFSRGIQI NYSYGPVSAS
VSWNDGYFSN RYNVISGLLT YTINPENSVS LYADGNTGHT GTINDLSTLR FSKNGYVDSS
LVYDNSNIYG LYYTYSGSHF TITPELQYMY TPINRAFGTT QSSNDISAMI HADYYLTKNW
SIAAGVDYEH ANSTGEATAA TGGYFGYGAG SSAFGVMITP TYVDNEYFIR DELSYVHLTN
YSSGFGAGNR PDQFRDILET GIWF