Gene Lferr_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2398 
Symbol 
ID6878396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2364353 
End bp2365138 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID642790258 
Productprotein of unknown function DUF81 
Protein accessionYP_002220803 
Protein GI198284482 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAT TGACTTTTAG TCAGGATATC GATTGCATTC TGGCTGGTGT AATCGTGGGA 
TTTTCCTTGG GATTGATTGG CGGCGGTGGC TCCATTCTTG CTGTTCCATT GTTGCTCTAC
TGGGTCGGTG TACACGATCC TCATCTAGTT ATCGGCACGA CGGCGCTAGC TGTGGGTATC
AATGCTTTCA TAAATCTGAT TCCGCATGCG CGTGCCGGTA ATGTACGCTG GGCAGTCGCC
ATACGTTTTA CTATTGCTGG TATTATTGGA GCTTTTGCCG GTGCTGAGTT GGGGAAAGCG
ATCAATGGAA AATATCTACT CATCCTCTTT GCACTGCTCA TGCTTTGGAT TGCTGTAAGT
ATGTACCGGA CACGAGAAAA ACAGCCAGTG GTTCATAAAA ATATACCCAA ACACCATGCT
TGGGTATATT TTTATGGCGG TGGCACCGGT GTTTTATCAG GTTTTTTTGG CATTGGTGGT
GGTTTCCTCA TTGTTCCTGC ACTGATGCGT TCTGCGCGGT TGCCTATTTT GAATGCCGTC
GCTTCCTCAT TATTAGCCGT GGGAGCCCTA GGCACAGCCA CTGCCATCAG CTATTCCCTG
GAGGGCCTTG TAGACTGGCG TATTGCTGCG GAATACATAG CTGGTGGAAT CCTGGGGGGA
TGGTTGGGGG CACTTAGTGC CGATAAACTG GGACAGCGCA AAGCGGCGTT GAATGATATC
TTTATCGGTG CCATAGTTTT GGTCGCCATT TATATGTTAT ACAGAGAAAT GGGCTATTTC
ATATAA
 
Protein sequence
MIALTFSQDI DCILAGVIVG FSLGLIGGGG SILAVPLLLY WVGVHDPHLV IGTTALAVGI 
NAFINLIPHA RAGNVRWAVA IRFTIAGIIG AFAGAELGKA INGKYLLILF ALLMLWIAVS
MYRTREKQPV VHKNIPKHHA WVYFYGGGTG VLSGFFGIGG GFLIVPALMR SARLPILNAV
ASSLLAVGAL GTATAISYSL EGLVDWRIAA EYIAGGILGG WLGALSADKL GQRKAALNDI
FIGAIVLVAI YMLYREMGYF I