| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2382 |
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| Symbol | |
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| ID | 6878378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2352914 |
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| End bp | 2354575 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790243 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002220790 |
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| Protein GI | 198284469 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.407653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGCA GGCTTGGGGG CATCGTGGCG GGTATTGCAC TGTGCCTTAC CGCCGGAGGT
GCGGCCGCCG ATTCCCCATC AGACGGCATG ACCGGGGAGC AGCTCTACTA TCTGCTGGTG
GCTGAGTTCG CCACTGTACA GCGGCAACCG CAACTGGCCA TTCCCGCTTG GCAGAAAGCC
GCCAAACTGG CACCAGAACC CAATGTTCTC AGGCGGGCAA CGCAGGCTAT CGCCCGGTTT
GGCGATTTTC AGGATGCGCT GCAACTCGCC AGACGCTGGC GGCAGGCCGC CCCGGGAAGC
GCCGAAGCGG ATCAGTTCGA AGCCGCGTTG CTTCTGACCA CAGGCCAGGA CGAGCAGGCC
TTGCAATTGC TGCAGGCCAC ACTGGCCCGC TTCCCGGACG ACCCGAAGGT CACCCTGCAG
TTCGCCGAGT TATTGGTGAC CCACGGGCGC AGCGGTGAGG CGCGGCGATT ACTAAGCGCA
TTGGCCGACA AGGACCCGAA ATCCGCAGCC GCCTATTATG CGCTCGGGCG CATCGATCTT
CTTGAAAAAC GACCGGAACA CGCTATCTCC TGGCTGGAGA AGGCGCTCGG CATCCGTCCT
GACTGGCAGG AAGCCGCCAT CAGCCTCGCC GAAGCCCTGC AGGCCGTTCA AGGCCCGGCA
GCCGCCTTGC GCAGCATTCA AAGCTTCACC GCCAGCCATC CCGAGGCTAC TCTCGCTCGC
CAATATCTGG CAGCGCTCTA TCTTCAGATG GGCGGCCTGA CCCAGGCCTA TCGCCTCTAT
CAGGACATGG CGCGGCAGAA CCCCGATGAC CCCGACATCC TCCTTTCTCT CGGACTCATG
GACATCGACC GGAAGGACTG GAAGAGAGCG GAAAGCGTTT TGCTGCGTGC CCGGAATCTG
GCGCCCCAGT CCCCCGTCCC GGTCTACTAT CTGGGCCGCC TCTACGAGGC ACAGGACCGA
TGGGCAGAGG CGCTGCAGTG GTACCAACGC ATCCATTCGG GCCCCCTCTA CCCTGCAGTC
GAACTACGCA GCGCCCGGGT GGAATACCTG CTGGGTCATC ACGACAAGGC TATCGACAAA
CTGCGGGCAC TGGCGGCCGC GCATCCGCAG GATGCGCAGA TTCCGCTGCT GGAAGCGGGC
CTGCTGCAGG ACAGCGGTCA CCTTCCACAG GCCCTGCAGG TAATCAACGA CGCCTTGCAA
CGCATGCCGG AGCAGCCCAG CCTCTGGTAC GCCCAGGGCG CCATCTATGA GCAACTGAAA
GATTATCCGG CCATGGAAAA GGCCATGCGT ACGGTTATCC ACCTCGCGCC GAACCATGCA
CAAGCCTACA ATTTCATTGG CTACAGCCTG GTGGAGCGGC ACAGCGATCT GGCCGAAGCA
CAAAAATTGC TCACCAAGGC CCTGAGTCTG AGCCCTGACA ATCCCGAGAT CCTCGACAGC
GTCGGCTGGC TTTATCATGC GCGGGGTGAC AATGACCGAG CCCTGGGATA TCTGCAGAGG
GCCCATGCGG CATTGCCGGA TGAGGCCGAT ATCAGCGCAC ACCTCGGAGA AGTCCTCTGG
TCGCTGGGAC GCCATGCGGA GGCACGGCAG GTCTGGCAGC ACGCGCTGCA AAAACACCCA
GATGATGCCG CCCTCCAAAG GGCTCTCAAC CGCCAGCCAT GA
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| Protein sequence | MRSRLGGIVA GIALCLTAGG AAADSPSDGM TGEQLYYLLV AEFATVQRQP QLAIPAWQKA
AKLAPEPNVL RRATQAIARF GDFQDALQLA RRWRQAAPGS AEADQFEAAL LLTTGQDEQA
LQLLQATLAR FPDDPKVTLQ FAELLVTHGR SGEARRLLSA LADKDPKSAA AYYALGRIDL
LEKRPEHAIS WLEKALGIRP DWQEAAISLA EALQAVQGPA AALRSIQSFT ASHPEATLAR
QYLAALYLQM GGLTQAYRLY QDMARQNPDD PDILLSLGLM DIDRKDWKRA ESVLLRARNL
APQSPVPVYY LGRLYEAQDR WAEALQWYQR IHSGPLYPAV ELRSARVEYL LGHHDKAIDK
LRALAAAHPQ DAQIPLLEAG LLQDSGHLPQ ALQVINDALQ RMPEQPSLWY AQGAIYEQLK
DYPAMEKAMR TVIHLAPNHA QAYNFIGYSL VERHSDLAEA QKLLTKALSL SPDNPEILDS
VGWLYHARGD NDRALGYLQR AHAALPDEAD ISAHLGEVLW SLGRHAEARQ VWQHALQKHP
DDAALQRALN RQP
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