Gene Lferr_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2379 
Symbol 
ID6878375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2349578 
End bp2350444 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID642790240 
Productprotein-(glutamine-N5) methyltransferase, release factor-specific 
Protein accessionYP_002220787 
Protein GI198284466 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.158146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG ATTCAGGCGT AGCACACCCT CTGTCACGCA GCCTGCGCGA CTGGCAGCAT 
CATCTGCGCG AACGACTGCG GGTAGTCAGC GATCAGCCGG AGCAGGAAGC GCGCTGGTTG
CTGGCCGCTG CCCTGGGGCT GGATGCGACA GCCCTGCTCC GCAATGCCTT GCTGCCCATT
CCTGGGGACC AGGGAGAACA GATTGTCGCA CTGCTCGACC AGCGCCTCGC AGGAGTCCCT
CTGGCCTATT GTCTGGGCGA GTGGTCTTTT TACGGGCTGG ACCTGCGCGT AAGCCCGGAG
GTGCTGATCC CCCGTCCGGA TACCGAGACG TTGGTGACCC TGGCTCTGGA GGGACTGGCG
GAGGAGGGCG CGGTGCGCGT GCTCGATCTC GGCGCCGGTT CCGGGGCCAT TGCCCTGGCC
ATCGCCCTGG CGCGGCCGCA GGCGGAAGTC TGGGGCGTGG AGCACAGCCC GGCGGCGTTG
CGGGTGGCGC GCGCCAACGG TGCGCTTCTG GCGTCGCGGG TACATTGGCT GGAAGGCGAC
TGGTATGCGC CACTGGATGG CGCCCTGCGT TTTGACCGGA TAGTAGCCAA TCCCCCTTAT
CTGGCTGATG ACGACCCTCA TCTTCCCGAT TTGCATCATG AACCCCGGGA TGCCCTGGTG
GCAGGCCCCC GTGGCCTGGA GTGCCTGGAA CGCATCATTG CCGGCGCATA TGAACGTCTC
TCGACCAGCG GCATGCTCCT GCTGGAGCAT GGTCCGGATC AGGGAGCCGC GGTGCGCCGC
CTGCTCGGCA ACGCCGGTCT CTGCGCCGTG CGGACCCGCT GTGATCTGGC GGGGCGCGAA
CGTGTGAGCA GCGGAACGAG GATCTAG
 
Protein sequence
MTSDSGVAHP LSRSLRDWQH HLRERLRVVS DQPEQEARWL LAAALGLDAT ALLRNALLPI 
PGDQGEQIVA LLDQRLAGVP LAYCLGEWSF YGLDLRVSPE VLIPRPDTET LVTLALEGLA
EEGAVRVLDL GAGSGAIALA IALARPQAEV WGVEHSPAAL RVARANGALL ASRVHWLEGD
WYAPLDGALR FDRIVANPPY LADDDPHLPD LHHEPRDALV AGPRGLECLE RIIAGAYERL
STSGMLLLEH GPDQGAAVRR LLGNAGLCAV RTRCDLAGRE RVSSGTRI