| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2378 |
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| Symbol | |
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| ID | 6878374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2348763 |
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| End bp | 2349575 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790239 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_002220786 |
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| Protein GI | 198284465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.067562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGT TGCCCGAGGT CGAAGTCACC CGTCTGGGTA TCGCTCCCCA TCTGCGGGGA
CGGCGCCTGG AGGGGGCCGT GGTGCGGGAC AGCCGCCTGC GACTGCCCGT GAATGACGAC
CTTGCGGCGC GGGTGAGCGG GCAGCGTCTG CTGAACCTGC GGCGGCGGGG CAAGTACTTG
CTGCTCGATC TGGAACGGGG AACGATCCTG ATCCATCTGG GAATGAGCGG GCACCTGCGC
GTCCTCCCCC AAAGCGCCCC CGTGCAGAAG CACGATCATG TCGATCTGCT GTTTGCGGAC
GATCTCTGTC TGCGCTTTCA TGACCCGCGC CGGTTTGGAG CCGTACTCTG GCTTGACGAT
GCCGACCACC ATCCCCTTCT GCAGCATCTC GGGCCGGAAC CCCTGGGCGA TGTCTTCGGC
GCGGAGTACC TTTACCAGCG GGGCCGAAAT CGGCAGATAC CGGTCAAATC CTTCCTCATG
GATGCCCATA TCGTTGTGGG CGTCGGTAAT ATTTACGCCA ATGAATCGCT GTTTGCGGCG
GGTATCGATC CACGCCGTCC TGCGGGACGG ATCGCCCTGC CGCGTTACAT GAAACTGGTG
CAGGCGGTGC GCACCGTCCT GGAGGCCGCC ATTGCCCAGG GTGGAACGAC CTTGCGTGAT
TTTACCCGAC CGGATGGCGG GAATGGATAT TTTCGACTAT CTCTGGCGGT GTATGGACGA
GAGGGGGAGC CTTGTACACA TTGTGGTGCG CCGTTACAGG GCGTCCGCAT CGGGGGCCGG
GCGACGATCT ATTGTTCCCA ATGTCAGCGC TGA
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| Protein sequence | MPELPEVEVT RLGIAPHLRG RRLEGAVVRD SRLRLPVNDD LAARVSGQRL LNLRRRGKYL
LLDLERGTIL IHLGMSGHLR VLPQSAPVQK HDHVDLLFAD DLCLRFHDPR RFGAVLWLDD
ADHHPLLQHL GPEPLGDVFG AEYLYQRGRN RQIPVKSFLM DAHIVVGVGN IYANESLFAA
GIDPRRPAGR IALPRYMKLV QAVRTVLEAA IAQGGTTLRD FTRPDGGNGY FRLSLAVYGR
EGEPCTHCGA PLQGVRIGGR ATIYCSQCQR
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