Gene Lferr_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2373 
Symbol 
ID6878369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2344263 
End bp2345294 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID642790234 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_002220781 
Protein GI198284460 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.119612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000783963 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGTTCG ACTGGTTCAA GCGTAACAAA AGCCTCCCTG CGGGGGAAAC GTTCGCCGAA 
GAGGTGAACT CCCCTGCCAC TGTGGCGACT ATCCCGGAAG ATACCCCCAA GGGACTTTTC
TCTCGTCTTC GGCAAGGTCT GGCCCGCAGC CGGGAACAAC TGGCCGGGGG TGTAGGGCGT
CTGGTACTTG GTAAAAAGGT TATCGATGCC GATCTGCTGG AAGAACTGGA AGCCTTGCTG
CTACAGGCGG ATCTCGGCAG CGCCGCAACC CGCGAAGTCA TGGACAGCGT CACGGAGCGG
GTGCGTCGCA ACGAACTCAC GGACCCCGCC GCGCTCCAGG CGGCACTGCG CGAGTCGCTT
CTGGATATCC TGCGTCCCCG CGCACAACCC TGGTCGCCCG AGAAGGGGCA TTCTCAGGTG
TTGCTCATGG TCGGTATCAA CGGCGCAGGC AAAACGACCA CCATCGGTAA ACTGGCGGCA
CGCTGGAAGG CGGAAGGTTT CACGGTGGTG CTTGCTGCCG GGGACACCTT CCGCGCCGCT
GCCGTCGAGC AGTTGCAGGG CTGGGGGAGG CGCGCGCAGG TGCCGGTGGT GGCTCAGGGT
ACGGGCGCTG ACAGCGCCTC CGTGATTTTC GATGCGCTGA CCACGACCCG CGCGCGTGGC
AGCGACCTGC TCATCGCCGA TACCGCCGGG CGCCTCCACA CCCAAGGCCA TCTCATGGAA
GAGTTGAAGA AGATCAGGCG GGTTCTCGGC AAACAGGATC CGGAGGCGCC GCAGCAGATC
TGGTTGGTGC TGGACGCCGG GACGGGGCAG AACGCCCTCA ATCAGGCACG TCAGTTTCAT
GACGCCGTGG GGCTGACGGG TATTTGCATC ACCAAGCTGG ATGGCACCGC CAAGGGGGGC
GTGGTGGCGG CCATCGCCAA GGCCCTGCCC ATCCCCATTC GCTACATTGG TGTCGGTGAG
CAGGTCGAAG ACTTGCGTCC CTTTGACCCC GAATCCTTTG TCGATGCCTT GTTTGCGGAG
TCGAAGTCAT GA
 
Protein sequence
MVFDWFKRNK SLPAGETFAE EVNSPATVAT IPEDTPKGLF SRLRQGLARS REQLAGGVGR 
LVLGKKVIDA DLLEELEALL LQADLGSAAT REVMDSVTER VRRNELTDPA ALQAALRESL
LDILRPRAQP WSPEKGHSQV LLMVGINGAG KTTTIGKLAA RWKAEGFTVV LAAGDTFRAA
AVEQLQGWGR RAQVPVVAQG TGADSASVIF DALTTTRARG SDLLIADTAG RLHTQGHLME
ELKKIRRVLG KQDPEAPQQI WLVLDAGTGQ NALNQARQFH DAVGLTGICI TKLDGTAKGG
VVAAIAKALP IPIRYIGVGE QVEDLRPFDP ESFVDALFAE SKS