| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2363 |
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| Symbol | |
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| ID | 6878359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2336783 |
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| End bp | 2337676 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642790224 |
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| Product | Diaminopimelate epimerase |
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| Protein accession | YP_002220771 |
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| Protein GI | 198284450 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000154753 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000163815 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCATT CCCATACGGA TTCTGCGTTG TCCGCCCTGC GTTTTACCAA AATGCAGGGC
TTGGGTAACG ACTTCGTCGT TTTTGATGGC ATCCGTCAGC GCGTCGATCT ACCCCCGGAG
ATGGTCCGCA CCATCGCCGA CCGCCACTTC GGCATCGGCT GCGATCAGAT CCTGCTGGTG
GAGGCCGCCG CATCCCCCGA TTGCGACTTC CGTTACCGCA TCTTCAATGC CGATGGCACT
GAAGTGGCGC AGTGCGGCAA TGGCGCCCGC TGTTTTGCCG TCTTCGTGCG CCGCGCCAAG
CTCACCGGCA AGGACATCAT CACCGTCGAG ACTCGGACGG GGCGGCTGAT CCTGCATCAC
CGGGGAAACG GAAATATCAC CGTCCATATG GGTGTTCCGC GACTCGTCCC CGCCGATGTC
CCCTTCCGCG CCGATGAAGA ATCCCCCGAA TACCTGCTGT CCGCGGGGAA GCACACCCTG
CGCATCGCCG CCGTTGGCAT GGGCAACCCC CACGCAGTGC TGCGTGTCGC GAGCGCGGCG
GAGGCCCCGG TGGCCACTCT GGGTCCGCGC ATCGAAACAC ACCCGGCCTT TCCCGAGCGC
TGCAACGTGG GCTTCATGGA AATCCGCGAC CGCAACCATA TTCAACTGCG GGTCTGGGAG
CGCGGCGCGG GTGAAACCCT GGCCTGCGGC AGCAATGCCT GTGCGGCCGT GGTGGCGGGC
ATCCGCTGGG ATGAACTGGA TCATGCGGTG GCGGTGACCC TGCCCGGGGG CACTCTGGAG
ATCGAATGGG CGGGTCCTGG GCATCCCGTG ATGATGACCG GTCCGGCGCA GGTGGTTTTC
GACGGGGTTT GGCCGTTGCC GGCAAAGATC AGGCACATTG AAGAGGGATC ATGA
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| Protein sequence | MNHSHTDSAL SALRFTKMQG LGNDFVVFDG IRQRVDLPPE MVRTIADRHF GIGCDQILLV
EAAASPDCDF RYRIFNADGT EVAQCGNGAR CFAVFVRRAK LTGKDIITVE TRTGRLILHH
RGNGNITVHM GVPRLVPADV PFRADEESPE YLLSAGKHTL RIAAVGMGNP HAVLRVASAA
EAPVATLGPR IETHPAFPER CNVGFMEIRD RNHIQLRVWE RGAGETLACG SNACAAVVAG
IRWDELDHAV AVTLPGGTLE IEWAGPGHPV MMTGPAQVVF DGVWPLPAKI RHIEEGS
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