Gene Lferr_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2362 
Symbol 
ID6878357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2335249 
End bp2336463 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content59% 
IMG OID642790222 
Productphosphate-selective porin O and P 
Protein accessionYP_002220770 
Protein GI198284449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000124461 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000787555 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAGAAGA ATCTCGTAGC TTTGGCCGTC GCAGCGGCTT TTGTGGTTCC CGGCGTTGCT 
TTCGCCGCAG ACACTTCCAA CGCGGATACC GGCCCTGTTG TGTTCGGTTA CGCCCAGATC
ACCGGCGCCC AGCAGTTTGG CACCGGCCCC GGCAGTTCCA ATGGCCTCAT TTTTGGTGCC
AACCGCATCC GTCTGGGTTT CAAGGGCGAA GCGGTTCCCG GCGTGACCTA TTACATCCAG
GGCGCTTATG ACGAGGCAGG TCTCGGCAAC GCAAACGCTC TGTTCCCGAA AACCGCTGGC
CTGCTCAACA ACGGCCTCGG CGGCAATATC GGAGGTGGCG CTCAGGCACA GTTGATGGAT
GCCTGGATCA ACTTTGCGCC GGTGCCCTTC GCCCAGTTGC AGGTCGGCAA GTTCAAGACC
CCGGAAGGTC TGGAATATAC CGGCACCGCG GGTAATGAAC TGATGTTCAT CTATCGCAAC
ATGAACCAGT CCCTGCTGCC CGGACGTTCC GCCGGCGCCA TGCTCCATGC CGACGACGTG
ATGGGTACGG GCATCGGCTA TGCCGTGGGT ATGTTTGACA ACACTTCGTT GGATCCCGCT
ACGGTATATA GCAATATCAA TACCTTTGGC GGTGGTCAGA GCGGACTCCT CAACGGCAAC
GGCAAGTACA TCGTTTCCGG CATGTTGAAG TACAGCATGG GCCCGCTGCT GACCGCGGAA
GTGAGCGGCA GTATGGGTAC AGAGAACAAT CGTGGCACCG ACAACCTGAC CAGCTGGAAC
GTTGGCGTCC AGGGCGGGAT GATGGGCATC CACTACGGTG CGGGATACAC CAAGGCTTCC
GGCGTGTCCG CATGGCCTTA CCTGAATATC AACCCGCTGT ATACCCCGGT CACTTATTCT
GCCACCGATT GGCATGCGGA ACTCGCCGCC AACCTGTACG AGATGACGCT GACCCCCGAC
TGGCTGGACG TCGAGGCTGC CGCGCGGTAT GACCAGTATG CGGTCCATGG TCAGGGCACC
TTGAGCAATA CCACCGTGGG CTTGAACTAC TATGTCAATC CCAACAACCC CCACGCCGCC
GAAGTGCAGT TGAACTACAT CCTGGCGACC CGTGGCGGTT CCATCGACAA CACCTATCCT
GGCCCCAACG GGCTTGCCCC CATCAACGGT GTGGCTTACA ACACCCTGAT GTTGCAGTTC
CAGGCCGGCT TCTAA
 
Protein sequence
MKKNLVALAV AAAFVVPGVA FAADTSNADT GPVVFGYAQI TGAQQFGTGP GSSNGLIFGA 
NRIRLGFKGE AVPGVTYYIQ GAYDEAGLGN ANALFPKTAG LLNNGLGGNI GGGAQAQLMD
AWINFAPVPF AQLQVGKFKT PEGLEYTGTA GNELMFIYRN MNQSLLPGRS AGAMLHADDV
MGTGIGYAVG MFDNTSLDPA TVYSNINTFG GGQSGLLNGN GKYIVSGMLK YSMGPLLTAE
VSGSMGTENN RGTDNLTSWN VGVQGGMMGI HYGAGYTKAS GVSAWPYLNI NPLYTPVTYS
ATDWHAELAA NLYEMTLTPD WLDVEAAARY DQYAVHGQGT LSNTTVGLNY YVNPNNPHAA
EVQLNYILAT RGGSIDNTYP GPNGLAPING VAYNTLMLQF QAGF