| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2359 |
|---|
| Symbol | |
|---|
| ID | 6878354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2332222 |
|---|
| End bp | 2332605 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642790219 |
|---|
| Product | ApaG domain protein |
|---|
| Protein accession | YP_002220767 |
|---|
| Protein GI | 198284446 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2967] Uncharacterized protein affecting Mg2+/Co2+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.342277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000770969 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACC AGCCCCCCAC AGAAATCCAG ATCAGCGTCG AGACCCGCTA TCTGCCGGAG
CAGTCCAGCC CGGAGCAGGA GCACTTCGCC TTCGCCTATC AGATCACGAT GCAGAATAAC
GGCCCGCAGA CGGCGCAGCT TCTCAGTCGT CACTGGATCA TTACGGATGC GGAAGGTCAT
GTTCAAGAGG TCAAAGGACC CGGCGTGGTT GGAGAACAGC CCACGCTGCA GCCTGGACAA
CGCTTCCGTT ACACCAGCGG GTCCGTCCTG TCCACGCCCG TAGGCAGCAT GCACGGTACC
TTCGAGTGGG TCAGCGATAC CGGCGAAAGT TTCGTGGTTC CCATCCCCGC CTTTCGCCTG
GCGGCGGCGA CCGTCTTCCA TTGA
|
|---|
| Protein sequence | MEDQPPTEIQ ISVETRYLPE QSSPEQEHFA FAYQITMQNN GPQTAQLLSR HWIITDAEGH
VQEVKGPGVV GEQPTLQPGQ RFRYTSGSVL STPVGSMHGT FEWVSDTGES FVVPIPAFRL
AAATVFH
|
|---|
| |