Gene Lferr_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2357 
Symbol 
ID6878352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2331099 
End bp2331758 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID642790217 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_002220765 
Protein GI198284444 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.635649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000842061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCGAGAA GTAAATCCAG TGAGAAGTGG CTGAAGGAGC ATTTTAAAGA CCCATTTGTG 
CAGCGCGCTA TGAAAGAGGG GTATCGCTCG CGGGCAAGCT ACAAATTGCT GGAGATTCAG
CAGAAGGATC ACCTGATCCG CCCGGGTATG CGGGTGCTGG ATGTGGGCGC GGCGCCGGGT
GGCTGGACGC AGGTGGCGGC GCCGTTGATC GGCAGGAAGG GGCGACTGGT GGCGGTGGAT
CGCCTGGCAA TGGACCCGGT GGCAGATGCC ACGGTCATCT GCGGCGACGT CTACGACGAC
GCCATACTGG CTGCCTGCCA GGAAGCCCTA CCGGGCGGCG CTGACCTGAT CATGAGTGAC
ATGGCGCCCA ACATGTCCGG TATTGCCAGT GTCGATCAGG CCCGCGCCAT TGATCTCGCG
GAGCTGGCTC TGGACATGGC CCATCGCTGG CTGGTGCCGG GCGGAGCGCT GCTGATCAAG
GTGTTTATGG GGTCCGGCGC GGAAGAGTTG CGCCGGGCGC TGCGCCGAGA CTTCAAGAAG
ATCGTGGTAC GCAAACCGGA GGCCTCGCGT GCGCGCTCTA CGGAGCAGTA CTGGCTGGCA
CTGGACTTTC AGGGGGTTGC GCAGGAAAGG TTGGACAATG GTGGGGCGAG TTCCCTATAA
 
Protein sequence
MARSKSSEKW LKEHFKDPFV QRAMKEGYRS RASYKLLEIQ QKDHLIRPGM RVLDVGAAPG 
GWTQVAAPLI GRKGRLVAVD RLAMDPVADA TVICGDVYDD AILAACQEAL PGGADLIMSD
MAPNMSGIAS VDQARAIDLA ELALDMAHRW LVPGGALLIK VFMGSGAEEL RRALRRDFKK
IVVRKPEASR ARSTEQYWLA LDFQGVAQER LDNGGASSL