Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2353 |
Symbol | |
ID | 6878347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2328501 |
End bp | 2329202 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642790212 |
Product | cytochrome c1 |
Protein accession | YP_002220761 |
Protein GI | 198284440 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.922589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000801731 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGT ATGTTGTGTG GGCAGGAATG GCCCTGGGAC TGTTTGCTGG CAGCGCATCG GGTGCATTCG CGGACGACGG GCCACAATTA TTGACACCGC ATTATACCTA TAATGCAAAG ACCATCATCA GCGGCGCGAG GTTATTTGCC ACCAACTGCA TGGCATGTCA CTCCATAAAA TTCATGCGTT ACGAGTTTTT GACCCATGAT CTGGGCATGT CCAGAGCCGA TGTGCAAAAA CAGGTCATGT TACCCACAGG ATCGGCATTC AAGGATAACA TGATATCCGC CATGCCGACC CAGATGGCGC ATAAATGGTT CGGGCTTCCC CCGCCGGATC TCAGCCAGAT GGTCCGCTAC AAGGGTCAGG ACTGGATCTA CACTTATCTG CTCTCTTTTT ACCAGGATCC CAAGCGCCCG TCGGGGTGGA ACAACCATGT ATTTCCCAAT GTGGCCATGC CGGACGTGCT TGCCCCCTAT GGCGGGATCG TCAATGAACA GGGAAAACTG CTTCGTGCGG GAGACGAATC TCCCCAGAAA TTCAAGGAAC AGGTCACGGA TATCGTTGCA TTTTTAAGAT TCGTGTCCGA TCCATCCGTC GTGCAACGAC ACGACGACGG GCCCTGGGTG CTTGGGTTGC TGGCGTTTTT TACCATAGCG GCCTATTTTC TCAAGAAGGA ATACTGGAAG GGGGTAAAGT GA
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Protein sequence | MKKYVVWAGM ALGLFAGSAS GAFADDGPQL LTPHYTYNAK TIISGARLFA TNCMACHSIK FMRYEFLTHD LGMSRADVQK QVMLPTGSAF KDNMISAMPT QMAHKWFGLP PPDLSQMVRY KGQDWIYTYL LSFYQDPKRP SGWNNHVFPN VAMPDVLAPY GGIVNEQGKL LRAGDESPQK FKEQVTDIVA FLRFVSDPSV VQRHDDGPWV LGLLAFFTIA AYFLKKEYWK GVK
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