Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2352 |
Symbol | |
ID | 6878346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2327264 |
End bp | 2328478 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642790211 |
Product | Cytochrome b/b6 domain |
Protein accession | YP_002220760 |
Protein GI | 198284439 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.16814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000117794 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTCA AAGAATGGTT TGTCAAACGT TCGCCGCTGC CCGAAATGTG GCGGGAACAC ATGGCCGAAT ACTACGCGCC AAAGAACTTC AACATTTTCT ACTACGCCGG GTCGTTGCTC TTGCTGATGG TGGTGCTGCA GTTCCTGTCG GGATTCCTGG TGCTGGCGCA TTACATACCT ACCGCCAAGG GTGCATACGA CTCCGTTTAT GGCATCATGT ACGACGTGCA TTACGGCTGG CTCATGCAGT ACATGCATGT GGATGGCGTA TCGCTGATAT TCGTGCTGCT GTATGTGCAC ATGGCACGGG GCATGCTGTA CGGTTCCCAC CGATCACCAC GGGAACTCGT CTGGATCATC GGCTATACGA CCTATCTGGC TTTCATGGCG GAGGCATTCT TCGGATATGT GTTGCCTTAT TCAAACCTCT CCTACTGGGC CGGCACGGTA ATCACTTCTT TATTGAAGTC CATTCCGTTT ATCGGCGGTT GGGTTACCAC CCTGGTACGC GGCGGGCCCG GCATGAGCGG CGACACGCTG GACCGGTTCA TGGCGCTGCA CGTTACATTG GTGTTTCTGG TCATCGTCGG GCTGATCGTT TTTCATATCC TTTATCTCCA TAAAGTCGGT TCCAACAATC CCGATGGCAT CGAGATCAAG GCGAATAAAG GGCCTGATGG CCATCCCGTG GACGGCATTC CGTTTCACCC CTACTACTCC GTAAAAGATT TGTTTGGATT CGGTGTATGG CTGATCATCT TTGGCGCGAT CATCTTCTAC GCGCCGACGT TTCATCATAT TTTCCTGGAA CGTACCATGT CCACGCCGGC AAATCCGCTC AAAAGTCTGC CGGATGTCAC GCCGCCGTGG TATCTATCGC CCTTTTACGC GATGCTGAGA TCCATACCCA ACAAGACTGC CGGCATCCTG TTAATGGTGT TCGCGGTGCT GGTCCCATTC GTGCTCCCAT GGCTGGACAG AAACCCGGTG AAATCGACGC GATATCGTCC GGTCACCCGT ATCCTGCTGA TCATATTTTT CATTAACTTC TTCGTGCTTG CCTATCTGGG AGAGCAGCCT CCGCTGCCGA AATATTTTTT CGCGGAAAGA TTGGGGGCGT TCATCTATGT GGCGTTCTTC CTTTTGCTGC CGTTCGTGAG CAAATTCGAA CCGACCAGGA CACCGCCGGC GCGCGTCCGT TTCCATGCCC ACTGA
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Protein sequence | MSFKEWFVKR SPLPEMWREH MAEYYAPKNF NIFYYAGSLL LLMVVLQFLS GFLVLAHYIP TAKGAYDSVY GIMYDVHYGW LMQYMHVDGV SLIFVLLYVH MARGMLYGSH RSPRELVWII GYTTYLAFMA EAFFGYVLPY SNLSYWAGTV ITSLLKSIPF IGGWVTTLVR GGPGMSGDTL DRFMALHVTL VFLVIVGLIV FHILYLHKVG SNNPDGIEIK ANKGPDGHPV DGIPFHPYYS VKDLFGFGVW LIIFGAIIFY APTFHHIFLE RTMSTPANPL KSLPDVTPPW YLSPFYAMLR SIPNKTAGIL LMVFAVLVPF VLPWLDRNPV KSTRYRPVTR ILLIIFFINF FVLAYLGEQP PLPKYFFAER LGAFIYVAFF LLLPFVSKFE PTRTPPARVR FHAH
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