| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2350 |
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| Symbol | |
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| ID | 6878344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2325776 |
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| End bp | 2326585 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642790209 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002220758 |
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| Protein GI | 198284437 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0807012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000111749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGAAA ATGATTATAC CAAGGCGAAA GGCGACGGCA TCCTGGACGG GAAAACGATA
CTCGTGACTG GTGCGGGAGA TGGCATCGGC AGGGCGGTGG CCATCGAATA TGCCCATCAA
GGCGCTACGG TCGTTCTGTT GGGCAAAACG AAGCGCAATC TGGAAGGCGT CTACGATGAA
ATCACCGACT ATGGCTATGC CGAACCGGCC ATCCTCGTGG TGGATCTGGC CGACCCGGCA
AGCGACGCGT TCAAAACCAT AGGCGCCGCC ATTTCCAGCG AGTTCACCCA ACTGAACGGC
ATCGTGCACA ACGCCGCGGA ACTCGGAATG CTGACCCCCC TGGAGAACTA TGAAGGGGCA
TTATGGGACC ATGTATTTCA GGTCAACGTA AAGTCTCCAC TGCTGGTGAC ACAGCAGTGC
CTCCCATTAC TGAAAGAGGC ACCATACGCC TCCATTATTT TTACCACAGA TGAGTCCGGC
GTTAAGCCCA AGGGCTATTG GGGCGCCTAC GGCGTGAGCA AGGCGGCCAT ATTGCACATG
GCCCGCATGT GGGCGATAGA GTATGCCAAC ACGCCTATTC GGGTAAATAT CGTAGACCCG
GGTCCGTGCC GAACGGGGCT GCGCCTGCTC ACGCATCCCG GCATGCCGAT GAAGCGATAT
ACGCCGCCTG AAGCCATCAC CAGTATCTAT ACACAATTAA TGGATTGTGA CGTTCTGGGT
CATAACGGCG AGTTGTTTTA TGCCCAAAAT TTCATCAATC CCGATCTGGA CGACAGGACG
GAAAAGGATT TGGCAACTTC TACGGTGTAG
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| Protein sequence | MTENDYTKAK GDGILDGKTI LVTGAGDGIG RAVAIEYAHQ GATVVLLGKT KRNLEGVYDE
ITDYGYAEPA ILVVDLADPA SDAFKTIGAA ISSEFTQLNG IVHNAAELGM LTPLENYEGA
LWDHVFQVNV KSPLLVTQQC LPLLKEAPYA SIIFTTDESG VKPKGYWGAY GVSKAAILHM
ARMWAIEYAN TPIRVNIVDP GPCRTGLRLL THPGMPMKRY TPPEAITSIY TQLMDCDVLG
HNGELFYAQN FINPDLDDRT EKDLATSTV
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