Gene Lferr_2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2349 
Symbol 
ID6878343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand+ 
Start bp2325111 
End bp2325770 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID642790208 
Productcytochrome c class I 
Protein accessionYP_002220757 
Protein GI198284436 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.461178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones3 
Fosmid unclonability p-value0.0000000978123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCATGG CTTCGGCGGC CTATGGCTCC CCTCTCGCCC AAACGGTCTC CGCCGCCCCC 
GCAGCGGCTA CGGCCAGTGC GGTCAGTGCT ACCGCGGCGA CGGCATCCGT CACCGCAAGC 
GGTATCCCCA CGGTGGTGCA ATCCACCTGC ATGGCCTGTC ATGGCATGCA GGGCATAGCG 
GCTGACGGGG GCATGTTCCC GAACCTGGCG GGGCAATGGA AGCCTTACCT TTTGCGCCAG 
CTCGATCACT TCAAAACCCA TGTCCGCGCG GACCCGCAAT CACCCATCAT GTGGGGGATG 
GCGGCTCCGC TGACGGCCGC GCAGATGCAG CAGGTCGCCG ACTACTTTTC CTCCCAGAAA 
CCCGCGTCGG GACACGTTTA CGATCCCAAA CTCGTGGCCG AAGGGAAAAA GCTGTACTTC 
GGTGGTCTGC CCGACAAACA CATGCCGGCC TGCATGGCCT GCCATGGCGC TACACTGGCC 
GGGCTGCCCC CTTATTTCCC CAGACTGGCC GGGCAGAAAC GCACCTATGT GATCAATCAA 
CTCACCTATT TCAAATCCGG GCAGCGGGTC GCCACCCACA AGGGCATCAT GCAATACGTG 
GCTTCCAGAC TGAACCCGAA ACAAATCACG GCACTGGCCG CTTACATAAG GTCCCGGTGA
 
Protein sequence
MVMASAAYGS PLAQTVSAAP AAATASAVSA TAATASVTAS GIPTVVQSTC MACHGMQGIA 
ADGGMFPNLA GQWKPYLLRQ LDHFKTHVRA DPQSPIMWGM AAPLTAAQMQ QVADYFSSQK 
PASGHVYDPK LVAEGKKLYF GGLPDKHMPA CMACHGATLA GLPPYFPRLA GQKRTYVINQ 
LTYFKSGQRV ATHKGIMQYV ASRLNPKQIT ALAAYIRSR