| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2347 |
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| Symbol | |
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| ID | 6878341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2323380 |
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| End bp | 2324561 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642790206 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_002220755 |
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| Protein GI | 198284434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.6039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000126588 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTTGC CATACCTGAA GATCAAAGGA CGGTCCCTAC TCCCGGTGAT ACAGGGGGGT
ATGGGTATTG GTGTTTCCGC ACACAGCCTG GCTGGGGCGG TGGCTGCGGA AGGGGCGGTC
GGAACGATTG CCAGCGTCGA GTTGCGGCGA TTGCACGAGG ACCTGATGCG ACACCTGCGA
CGCCTGAGAG ACCCCGCAGC CTCGGCCCAG GCAAACCTGA CCGCACTGGA TCGGGAGATT
CAGGAAGCAC GGCGAATCGC CGGCAAGGAG GGGTTCATTG CCGTCAATGT CATGCATGCC
ATTTCCGGCT ATCGGGAGCA CGTGCTTCAA GCCATCAGGA GTGGGGTGAA CGCGGTGATC
GTGGGCGCGG GTCTGCCCAT GGATCTGCCC ACACTGGCTG CGGAATTTCC CAACGTCGCA
CTGATCCCGA TCCTTTCGGA AGCGCGCGGC GTGCAGGTGG TGGTGCGCCG CTGGATGCGC
CAGAAGCGCC TTCCGGACGC CATCGTCATC GAGAACCCCC AGTTCGCGGG CGGGCATCTG
GGCGCCACCC GTCTGGAGGA CGTTGCGGAT TCCCGGTATG GTTTCGCCAA TGTTTTGCCC
GCGATCCGCA AACTGTTCGA AGAATTAGGC CTGAAAGCCG ACCAGATTCC ACTCGTCGCC
GCCGGAGGGA TCTCTTCCTT TCAGAAAATG CGGGAGATAT TTTCTCTCGG CGGCAGCGGC
GCCCAGTTGG GCACCCCCTT CGCCGTAACC ACCGAAGGCG ACGCACACAT CAATTTCAAA
CGTGTCCTGG CGGATGCGAT GCCTAAAGAT CTCGTGACAT TCATGAGTTC GGCGGGTTTA
CCCGCGCGCG CGGTGCTTAC CCCCTGGTTG CGCCGCTACC TGGGACGCGA GAGGAGGCTG
CGCGCCTGCG CGAGCCCCGA TCACTCGCAG TGCCCCAGCC AGACGGAGTG CTTGGTTCAT
TGTGGTTTCA AGGATGGGCA TTCATCTTCC GGACAATTCT GCATCGAGGC GCAGCTCGCT
GCTGCGCAAC GCGGTGACGT AGAGCATGGA CTGTTTTTTC GCGGCGCCGG ACAGTTACCC
TTCGGACAAC AGATCAGAAG CGTTCGGGAG CTTTTTGCCA CGCTGCTGGG TGAAACCGCG
CAGACCTCCG TGGAGGAGTG CATACCCAGG GTAGCTGTAT GA
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| Protein sequence | MDLPYLKIKG RSLLPVIQGG MGIGVSAHSL AGAVAAEGAV GTIASVELRR LHEDLMRHLR
RLRDPAASAQ ANLTALDREI QEARRIAGKE GFIAVNVMHA ISGYREHVLQ AIRSGVNAVI
VGAGLPMDLP TLAAEFPNVA LIPILSEARG VQVVVRRWMR QKRLPDAIVI ENPQFAGGHL
GATRLEDVAD SRYGFANVLP AIRKLFEELG LKADQIPLVA AGGISSFQKM REIFSLGGSG
AQLGTPFAVT TEGDAHINFK RVLADAMPKD LVTFMSSAGL PARAVLTPWL RRYLGRERRL
RACASPDHSQ CPSQTECLVH CGFKDGHSSS GQFCIEAQLA AAQRGDVEHG LFFRGAGQLP
FGQQIRSVRE LFATLLGETA QTSVEECIPR VAV
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