Gene Lferr_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2329 
Symbol 
ID6878323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2306955 
End bp2307413 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content72% 
IMG OID642790188 
Productpeptidase A24A prepilin type IV 
Protein accessionYP_002220737 
Protein GI198284416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATGGG AGGAAATGGG CGTGGCCTTG TGGGCGGTGT GGGGGGCGCA GGGCGACTAC 
CGTCGCCAGC GGTTGCCCAA CCGCCTGACC CTGAGCGCCC TGGCGCTGGG GCTGGCGGTG
CTGCCGCTGA CGGGGCGCTG TCTCCTGGGC GCGCCCTGGA GCGCCGCCCT GCTGGGGGTC
GCCGCCGCTT TTCTCGCCCT GCTGCCCGCC TATGTCTGGC GCCTGGTGGC GGCGGGCGAC
GTCAAGTTTT TCATGGCCAT GGGCGCCCTG GGCGGGGTGG ATGTGCTGTT CCCGATCTAT
CTCGCGGCGG GGGTCATCAC CCTGGCGCTG GTGGCCCGCG ACCGCCTGTT CACGGGCACG
GTGCAGCGGC AATACCCCTA CGGCGTGGGT CTGGGTCTGG GCTGCGCGCT GGTGGTGCTC
AGTCACTGGC GGCTGGCCCT GCACTGGCCC CTGTCATGA
 
Protein sequence
MGWEEMGVAL WAVWGAQGDY RRQRLPNRLT LSALALGLAV LPLTGRCLLG APWSAALLGV 
AAAFLALLPA YVWRLVAAGD VKFFMAMGAL GGVDVLFPIY LAAGVITLAL VARDRLFTGT
VQRQYPYGVG LGLGCALVVL SHWRLALHWP LS