| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2316 |
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| Symbol | |
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| ID | 6878310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2291842 |
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| End bp | 2294016 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642790175 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002220724 |
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| Protein GI | 198284403 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG AAGAAAACCA CGGCGGCGCC ACCGGGCCCG CCGCTCAAGG CAAGGCCGGT
GGCATTGCCT CCAGCGGGCT GCAATGCCTC GCGCTGATCG CCGGGTATTA CCAGCGGCCG
TGTAACGCGG AGCAGTTGGC GCGCGCTCTG GGCATGTCCG AACCCATTCT GCCGCTTGGC
AAAATCATTC TGGCGGCCCG CGAAGTGCGT CTGGTGGCGA AGGCGGTTCA GTTGAAATGG
ACGGATCTGG CCCGCCAGAC GTATCCGGTG ATGGCCGAGT TGCGGGATGG CAATTACCTC
GTGCTGGCCC GCTTCGAGAA TAACCGCCTG GTCGCGGTGG ATCCGCAGCG TGGTCAACTG
ATACTGGATG AAGCCACCCT CCATCAGGTC TGGACCGGAC GGGTGTTGCT CATCAAGCCG
CGCTTCGAGT GGAACGCGGC GGGGCAACGC TTCGGGTTGC GCTGGTTCAT TCCCATCATT
CTCAAATACC GGCAACCGGT CATCGAAGTC CTGGTGGCGG CTTTCGTGGT GCAGATGTTT
GGTCTGGCCA TGCCGTTGTT CATCCAGTTG GTGATCGACC GGGTGCTGGT CTATCACAGT
CTGCCCACCC TGGACATTCT GGCGGTGGGG ATGCTGGTGG TGATCGCCTT CGAAACCACC
CTGAATGTGC TCAAAACGCT GATGATGACC CATACGACCA ATCGTATCGA CGTCACCCTC
GGCGCGCGTC TGTTCGCCCA CGTGCTGCGT ATCCCCATGC GCTATTTTGA ATCCCGGACC
GTCGGCTCGA CCGTGGCGCG GGTGCGGGAA CTGGAGGTGG TACGGCAGTT TCTGACCGGA
CCCACCCTCA TGGCGTTCAT CGACGTGTGG TTCGTCGGCA TTTTCCTCGT CGTATTGTTC
TTTTACAGTG TGCGCCTGAC CCTGGTGGTG CTGGCCACCA TTCCCTTCAT GGTCGGCATA
TCCCTCCTGG TGTTTCCCAT TCTGCGACGG CTGTTGCAGG AGCGCTTCGA CCGGGGCGCC
GAAAACCAGT CCTTTCTGGT GGAGACCATC ACCGGTATTC AGACGGTCAA GGCGCTGGCT
GTGGAGTCCC GCATCTACCA GCGCTGGGAG CAGAGTCTGT CGCGCTATGT GATGGCTTCC
TACCGCGTCG ACCGTCTGGC CGGAGTCACC GGCTCCCTGA CCCAAATGAT TCAACGGATG
GGGACGCTGG CGATTCTCTG GGTGGGGGTC AAACTCACCT TGTCCGGAGA CATCAGCGTC
GGCGAACTGA TCGCCTTTCA GATGATCTCC GGCCAGGTGA CCGGCCCCAT CCTCCGTCTG
GCGCAGTTGT GGCAGCATTT TCAGCAGGTC GGGGTTTCCG TGAGCCGTAT GGGCGATTTG
ATGAATACGC CGGCGGAGCC GGTAATCGAC ATCGGCAAGG CCTCGCCGGG TTCGCTGCAT
GGCCGGGTCA CCCTGGAAAA TGTGCACTTT CGTTATACGG CGGATGGTGA CGAGGTGCTC
AAGGGCATCA GCTTTGATAT TCCCGCGGGC TCCTTTGTCG GCATCGTCGG GCGCAGCGGT
TCCGGCAAGA GCACCCTGGC GAAGATGTTG CAGCGTTTGT ATCTGCCGGA TTCGGGCAAT
GTGCTGATCG ACGGCATCGA TCTGCGCCAT GTGGAGCCCA ATTGGCTGCG CCGCCAGATC
GGCGTGGTGC TTCAGGATAA CTTTCTGTTT TCGGGAACCA TCCGGGAAAA TATAGCGATG
GTTTATCCCG AGGCGCCCCT GGACAGGATC ATTGCCGCGG CGGAACTCGC TGGTGCCCAC
GAGTTCATCA GCAAGCTCCC CGACGCCTAC GACACCAAGG TAGGCGAACG GGGGGATTCG
CTGTCGGGAG GCCAGAGGCA ACGCATCGCC ATCGCCCGCG CGCTGCTGGG CGATCCGCGG
ATATTGATTT TTGATGAAGC CACCAGTGCG CTGGATTATG AATCCGAGCG CATCATCTGG
AAAAACCTCT CCAAAATCTG CCAGGGGCGG ACGGTGTTCA TGGCGGCGCA CCGCCTGGCG
TCCATTCGCT CGGCGGATAT CGTCCTCGTC CTGGATGATG GCCGATTGGC GGAATATGGC
GCGCATCAGG CGTTGATGGC CCAGAAAGGG ATCTATGCCC TGTTGGCCCG CGACGAAGCA
GAGGAGGGGG CCTGA
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| Protein sequence | MTAEENHGGA TGPAAQGKAG GIASSGLQCL ALIAGYYQRP CNAEQLARAL GMSEPILPLG
KIILAAREVR LVAKAVQLKW TDLARQTYPV MAELRDGNYL VLARFENNRL VAVDPQRGQL
ILDEATLHQV WTGRVLLIKP RFEWNAAGQR FGLRWFIPII LKYRQPVIEV LVAAFVVQMF
GLAMPLFIQL VIDRVLVYHS LPTLDILAVG MLVVIAFETT LNVLKTLMMT HTTNRIDVTL
GARLFAHVLR IPMRYFESRT VGSTVARVRE LEVVRQFLTG PTLMAFIDVW FVGIFLVVLF
FYSVRLTLVV LATIPFMVGI SLLVFPILRR LLQERFDRGA ENQSFLVETI TGIQTVKALA
VESRIYQRWE QSLSRYVMAS YRVDRLAGVT GSLTQMIQRM GTLAILWVGV KLTLSGDISV
GELIAFQMIS GQVTGPILRL AQLWQHFQQV GVSVSRMGDL MNTPAEPVID IGKASPGSLH
GRVTLENVHF RYTADGDEVL KGISFDIPAG SFVGIVGRSG SGKSTLAKML QRLYLPDSGN
VLIDGIDLRH VEPNWLRRQI GVVLQDNFLF SGTIRENIAM VYPEAPLDRI IAAAELAGAH
EFISKLPDAY DTKVGERGDS LSGGQRQRIA IARALLGDPR ILIFDEATSA LDYESERIIW
KNLSKICQGR TVFMAAHRLA SIRSADIVLV LDDGRLAEYG AHQALMAQKG IYALLARDEA
EEGA
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