| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2310 |
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| Symbol | |
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| ID | 6878304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2285225 |
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| End bp | 2286190 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790169 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002220718 |
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| Protein GI | 198284397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.519602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGTAG ACCATTTTCG GAAGAACCGC GTATTCATTT GCGGTGTTGT CGGTCTTTTC
TGCATGTCGG CGTATCCGGA AGTCCGGGCA GCGACGGCCA GCATGGCGGT ACCGTCGCAG
AGTTTTCAGG AAGAACAGAC CGACCCCGCT GCGCTCGCCC GACATGCCGC CGCCCGCGCA
GATTACTGGC GCGGAATCTA CTGGACGGCA AAGGGCGATG CCCGGAAGGC GGTTGCGTAC
TGGCGAAAAG CCGCCGTCGC CGGTGACGCC GCGGCGGAGT TCAATATGGG TGACGCCTGC
TACGCCGGAC AAGGTATCGT TCGCAATCAC CAACAGGCCG CTTCCTGGTG GGAGAAATCG
GCGTTGCAGG GAAACGCTCG GGCCGCCAAC AATCTGGGAT ATGCCTATGC CCACGGTGAG
GGTGTTCCGC AAAATCCGGA GCGTGCGGTT TTCTGGTGGA AACGGGCCGC CGATGCTGGC
GACGCGCATG CGGAGCTCCT GCTGGGACTG GCGTATTACT ACGGCCGGGG GGTGCCAATG
GGCTACGAGC AGGCCAACGC TTACTTCCGC CTGGCCGCCA AGCAAGGCAA CGCCCTGGCG
GAGTTCGCCC TGGGAAATGA TTATGCCCAC GGCTATGGAA CGGCGCGCAA CGACCAGGCT
GCCTACACCT GGTTTTTACG CGCCGCGGAA CATGGCAACG TCAAGGCTGA GCTCCATCTG
GGCGGTCTGT TGTATCAGGG GAAGGGCGTG GCCCGGAATT ATCCGGAGGC GGTGTCCTGG
TGGAGGGACG CAGCATTGCA AAATGACCCG GATGCGGAAT TGCTGCTGGG GATCGCCTAT
GCACACGGCA ACGGCGTTGC GCAAAGCGAT GAGCGCGCGC GGTTCTGGTG GGATAAGGCC
CGTTCGCACG GCGGTAGCGC CGCTCGGCTG GCCTCACAGT TGATCGGGAA GTTGCCGCAG
TCCTGA
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| Protein sequence | MCVDHFRKNR VFICGVVGLF CMSAYPEVRA ATASMAVPSQ SFQEEQTDPA ALARHAAARA
DYWRGIYWTA KGDARKAVAY WRKAAVAGDA AAEFNMGDAC YAGQGIVRNH QQAASWWEKS
ALQGNARAAN NLGYAYAHGE GVPQNPERAV FWWKRAADAG DAHAELLLGL AYYYGRGVPM
GYEQANAYFR LAAKQGNALA EFALGNDYAH GYGTARNDQA AYTWFLRAAE HGNVKAELHL
GGLLYQGKGV ARNYPEAVSW WRDAALQNDP DAELLLGIAY AHGNGVAQSD ERARFWWDKA
RSHGGSAARL ASQLIGKLPQ S
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