Gene Lferr_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2306 
Symbol 
ID6878300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand+ 
Start bp2279163 
End bp2279825 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID642790165 
Productendonuclease III 
Protein accessionYP_002220714 
Protein GI198284393 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCAC AGAATATTCG TCGCTGTTTT GCAGCCCTGC GCGCCGCCAT TCCCGAACCC 
AAAACCGAGC TGATCTACGG CTCCCCCTTT CAGCTTCTGG TCGCCGTGGT GCTCTCCGCG 
CAAAGTACGG ACAAAGCCGT CAACGCCTGC ACCCGGACGC TCTTTGCGGT GGCACCGAAT 
CCCGAGGCGA TGGTGTCCCT CGGTGAAGAC GGCATCAAGG CCCACATCCA TCGTCTGGGA 
CTGTTCAACG CCAAGGCCCG GCATGTGCAT GCCCTGGCCC GGCAACTGCT GGCCCTGCAT 
GATGGCGAGG TGCCCGCAGA CCGGAAGGCG CTGGAAGCGC TCCCCGGCGT CGGCCGTAAA 
ACCGCCAATG TCGTCCTCAA TACCGAGTTC GGGCAACCCA CCATTGCGGT GGATACCCAC 
ATCTTCCGGG TCGGCAACCG GACCGGCATC GCCCCCGGCA AGACGCCCCT GGCCGTAGAA 
CAGGCCCTGC TCGCGGCGGT GCCCGCCGAA TACCGGCAGG ACGCCCACCA TCTCCTGATC 
CTCCATGGCC GCTATACCTG CACGGCGAGG CGGCCGCACT GCGGCCACTG CCCGATTTTT 
CAGTGCTGCG AATGGCCGGA CAAGCACCGG TGGGCGGCGA AGTCATCTCC TGGCGGCGCT 
TAA
 
Protein sequence
MDPQNIRRCF AALRAAIPEP KTELIYGSPF QLLVAVVLSA QSTDKAVNAC TRTLFAVAPN 
PEAMVSLGED GIKAHIHRLG LFNAKARHVH ALARQLLALH DGEVPADRKA LEALPGVGRK 
TANVVLNTEF GQPTIAVDTH IFRVGNRTGI APGKTPLAVE QALLAAVPAE YRQDAHHLLI 
LHGRYTCTAR RPHCGHCPIF QCCEWPDKHR WAAKSSPGGA