| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2298 |
|---|
| Symbol | |
|---|
| ID | 6878292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2269346 |
|---|
| End bp | 2270719 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790157 |
|---|
| Product | fumarate hydratase, class II |
|---|
| Protein accession | YP_002220706 |
|---|
| Protein GI | 198284385 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.25517 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGG AAACGGACAG CATGGGGGTG ATGGAGGTGG AGGACGATGC CCTCTGGGGC
GCCCAGACCC AGCGCTCTCT GCGTTATTTC GCCATCGGTG CGGAGCAGAT GCCCCTGCCG
GTGATCCACG CCCTGGCGCG GATCAAGCGG GCGGCGGCCT CGGTGAACGC CGAACTGGGT
CTGCTGGATG CGACGCTGGC CGAAAAGATC AGCGACGCTG CGGCGGAAAT CGTCGCGGGG
CGCTGGGATG CGCAGTTTCC CCTGCGGGTC TGGCAGACGG GCAGCGGCAC CCAGAGCAAC
ATGAACGTCA ACGAAGTCAT CGCCAACCGG GCCAATGAAA TGGCGGGGCA GCCCCGGGGC
AGCAAGGTGC CGGTACACCC CAATGATCAC GTCAATCTGG GCCAGTCTTC CAATGATGTT
TTTCCGTCGG CCATGCATAT TGCGGTGGCT TTGGCGGTGC ATCAGGGACT TTTGCCCGCC
TTGGCGCACC TGGAAGGGAC ACTGAAGCGC AAGACGGAGG ATTTTGCCCA CCTCATCAAG
GTCGGGCGTA CCCATCTGAT GGATGCGGTG CCACTGACTC TGGGGCAGGA GTTCTCCGGT
TATCTGGCGC AATTGCAGCA GGGTGTTCGC AGCCTGGAGC AGACCCTGCC CGGTCTTTAT
GCCCTGGCAG TGGGCGGCAC GGCGGTCGGT ACGGGACTCA ACTGCCACCC GGATTTTGCC
GGTGCAGTGG CTACGCGTCT GCATGCCGAG CTGGGCCTGC CTTTTCGCCC AGCGGCCAAT
GCGTTTGCGG CCCTGGCGGG ACATGAAGCG CTACTGCAAT TGAGTGCGGC GCTACGTGGG
CTGGCCATGT CCCTGATGAA GATCGCCAAC GATATCCGCT GGATGGCCTC CGGCCCACGG
GCCGGCCTGG GCGAACTGCA TCTCCCGGAA AACGAACCCG GTTCCTCCAT CATGCCCGGC
AAGGTGAATC CCACGCAAGC CGAGGCCTTG ACCATGGTCT GCGTGCAGAT TTATGGCAAC
GACGCGGCCA TTGCCTTTGC CGCCTCCCAG GGTAACTTTG AGCTGAATGT CTACAAGCCG
CTGATTGCCT ATAATATCCT GCAATCCATC GCACTGCTGG GCGATGCTGC CCGTTCCTTC
AGCGATCACT GTCTGCGCGA TTTGCAGCCC GTAGAAGGCC AGCTCCGCCG GAACATGGAA
GAGTCGCTGA TGCTGGTCAC GGCTCTGACA CCTGTGATCG GTTATGAAAA AGCTGCTACT
GTCGCCCAGC ATGCCTATCG CGAGGGCTGC ACCTTGCGAG AAGCCATCTT GGCGCTAGGT
TATCTTTCCG GCGAAGATGT CGACCGTCAT CTGCGTCCGG AGGCGATGCT TTAG
|
|---|
| Protein sequence | MRQETDSMGV MEVEDDALWG AQTQRSLRYF AIGAEQMPLP VIHALARIKR AAASVNAELG
LLDATLAEKI SDAAAEIVAG RWDAQFPLRV WQTGSGTQSN MNVNEVIANR ANEMAGQPRG
SKVPVHPNDH VNLGQSSNDV FPSAMHIAVA LAVHQGLLPA LAHLEGTLKR KTEDFAHLIK
VGRTHLMDAV PLTLGQEFSG YLAQLQQGVR SLEQTLPGLY ALAVGGTAVG TGLNCHPDFA
GAVATRLHAE LGLPFRPAAN AFAALAGHEA LLQLSAALRG LAMSLMKIAN DIRWMASGPR
AGLGELHLPE NEPGSSIMPG KVNPTQAEAL TMVCVQIYGN DAAIAFAASQ GNFELNVYKP
LIAYNILQSI ALLGDAARSF SDHCLRDLQP VEGQLRRNME ESLMLVTALT PVIGYEKAAT
VAQHAYREGC TLREAILALG YLSGEDVDRH LRPEAML
|
|---|
| |