| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2296 |
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| Symbol | |
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| ID | 6878290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2266120 |
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| End bp | 2268156 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642790155 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_002220704 |
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| Protein GI | 198284383 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.556426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0916418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC GCATACTGAT CACCAGCGCC CTCCCCTACG CCAACGGCCC CATCCATCTC
GGGCATCTGG TGGAGTACAC CCAAACCGAC ATCTGGGCCC GCTATCAGCG CCTGCGGGGC
CACGACTGCG TCTATGTCTG CGCCGATGAT GCCCATGGCA CGCCGATCAT GCTCCGTGCC
CAGAGCGAGG GCATCACGCC AGAAGAACTC ATCACCCGCA TGCACGGCGA TCATCTGCGC
GACTTTACCG GCTTCGGCAT TCGGTTCGAT CTGTATCACA GCACCCACTC GCCGGAAAAC
TTTGAAATTT CTCAGAGTAT CTATCGTGCC CTGCGGGCGG CGGATTACAT CAACGTCCGC
GAAATCGAAC AGGCCTACGA TCCCGTCGCC GGCATTTTCC TGCCCGACCG CTTCATTCGC
GGCACTTGCC CGCGCTGCGG CGCAGCGGAT CAGTATGGGG ATAGCTGCGA GGTCTGCGGC
GCCACCTACA GCCCCACCGA CCTTATCAAC CCTGTTTCCG CGGTCTCCGG CGCCGTACCC
GAGCGCCGCA ACTCGGAGCA CTACTTTTTT CAGCTCGGGG ATTTCAGCGA CTTCCTCCGG
CGGTGGATTC ACAGTGGTAC CTTGCAGGAA GAAGTCGCCC ACAAGCTGGA TGAATGGTTC
AGCATCGGCC TATCCGACTG GGACATCAGC CGCGACGCCC CCTACTTCGG CATTCCCATT
CCCGACGCGC CGGGCAAATT CTTTTACGTC TGGCTGGATG CATTACCCGG CTACATGGCC
GCCACCCAGC ACTGGTGCGC GGCCCACGGC CGCAATTTGG CCGATTACTG GGGCCCGGAT
TCCGCTGCCG AGATCTACCA TTTTATCGGC AAGGACATCA TTTATTTTCA CGGCCTGTTC
TGGCCGGCCA TGCTCAAGGG CTCCGGACAC CGCCTGCCGA CGGGTATATT CGCCCACGGG
CACCTGACGG TAAATGGCGC CAAAATGAGC AAGTCGCGCG GCACCTCCAT TACCGCCAGG
CAGTATCTCC AACATCTGAA TCCCGAGTTC CTGCGCTATT ACATCGCCAC CAAGCTCAAC
AGCCATGTGG AAGACATCGA CCTCAATCTC GAAGATTTCC TGCTCAGGGG CAACGGCGAC
CTGGTCGGCA AGGTAGTCAA TCTGGCCTCG CGCGCGGCGG GGTTCATCCA TCGCAGCTTT
GCGGGCCGAC TGGCCGCTTC CCTGGGCAAG GATCAGGCCT TTTATGACGG GCTGCTGCAG
ACCCAGGAGG CCATCGGCGA GGCCTACGCC GGACGGGAAT ATGGCAAGGC CATGCGCGAC
ATCATGGCGC TGGCCGATCA GATCAACGCC TATGTGGACC AGAACGCCCC CTGGACTTTG
GCCAAAGACC CGGCCCAGCA CGAGTCCCTG CACCGGGTCG TTACGGTCAC CCTGAACGGC
TTTCGGGTGC TGATCACCCT CCTCAGCCCG GTGCTGCCGG AGCTGTCGCG CAAGGCGCTG
GAATTCCTGC AGTGCGAACT GGACTGGGCG GGCCTGAGCA AGCCGCTTCT CGATCACCAG
ATCCTGCCCT ACAGCCATCT TCTACAACGT ATGGAAAAAA CCCAGGTGGA CGCCTTGATC
CAGAATCCTG CAGAAAGCCC CGCGACAGCC CCAGGCACGG CGGCGGCGCC AGTGCCCACG
CCCGTACCTG CCGAGGCCAG GGAGGAGAAT CCCTTTATCG GCATCGACGA CTTCAGCAAG
GTGGATTTGC GCATTGCGCG GATTGTTGCC GCGACCAACG TGGACGGCGC GGACAAACTA
CTGCACCTCA CCCTGGACAT CGGCGAGGGC ACCCGCTCGG TCTTTGCCGG CATCAAGAGT
GCTTACGATC CGGCCAGCCT CGTCGGCAGA CTGACCGTGA TGGTCGCCAA TCTGGCGCCC
AGAAAGATGC GCTTTGGCCT GTCCGAGGGC ATGGTGCTCG CCGCCAGCGG CCCGGAGGGC
GGCCCTTTCC TGCTCTCTCC CGACAGCGGA GCCCAACCCG GCATGCGGGT TAAATAG
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| Protein sequence | MKRRILITSA LPYANGPIHL GHLVEYTQTD IWARYQRLRG HDCVYVCADD AHGTPIMLRA
QSEGITPEEL ITRMHGDHLR DFTGFGIRFD LYHSTHSPEN FEISQSIYRA LRAADYINVR
EIEQAYDPVA GIFLPDRFIR GTCPRCGAAD QYGDSCEVCG ATYSPTDLIN PVSAVSGAVP
ERRNSEHYFF QLGDFSDFLR RWIHSGTLQE EVAHKLDEWF SIGLSDWDIS RDAPYFGIPI
PDAPGKFFYV WLDALPGYMA ATQHWCAAHG RNLADYWGPD SAAEIYHFIG KDIIYFHGLF
WPAMLKGSGH RLPTGIFAHG HLTVNGAKMS KSRGTSITAR QYLQHLNPEF LRYYIATKLN
SHVEDIDLNL EDFLLRGNGD LVGKVVNLAS RAAGFIHRSF AGRLAASLGK DQAFYDGLLQ
TQEAIGEAYA GREYGKAMRD IMALADQINA YVDQNAPWTL AKDPAQHESL HRVVTVTLNG
FRVLITLLSP VLPELSRKAL EFLQCELDWA GLSKPLLDHQ ILPYSHLLQR MEKTQVDALI
QNPAESPATA PGTAAAPVPT PVPAEAREEN PFIGIDDFSK VDLRIARIVA ATNVDGADKL
LHLTLDIGEG TRSVFAGIKS AYDPASLVGR LTVMVANLAP RKMRFGLSEG MVLAASGPEG
GPFLLSPDSG AQPGMRVK
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