| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2293 |
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| Symbol | |
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| ID | 6878287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2264350 |
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| End bp | 2265372 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642790152 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_002220701 |
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| Protein GI | 198284380 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.627899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0361411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAC GTGCCCGTCA CCTGCTCAAA TCCCTCATCG AACAGCATAT CGCCAAAGGT
GTGCCGGTCG GCAGTCGCCA GTTGGCCCGT GATGCTGGCC TCAACATCAG TCCCGCCACG
GTACGTAATG TCATGGCGGA CCTGGAGGAC GAGGGCTACC TGATCTCCCC CCACACTTCC
GCCGGGCGCA TTCCTACCCA TGTCGGCTAT CGTTTTTTTG TCGATGCACT GCTGCGGGTG
GTGCCGCTGT CGGCGGAATC CAACCGCCTG CTCATCCATC GCATCGGTTT TCGCGCTCCG
GATGCGGAAC AGGTGCTGCA CGCCGCCACC GGTATCCTTT CTGAACTGAC GCATATGGCG
GGCTTTGTGC GGGTGCCGCG GCGGGCAACC CGCATTTTGC GGCATGTGGA CTTCATCGCC
TTGCATGAGC GTGAGGTGTT GGCCATCTTC GTCACCGACA GGGGGGATGT GGAGAACCGC
CTGATCCGCA CCGAGCAACC CTTCGCGGCG GCGGAGTTGG CTCAGGCGGC CAATTGCTTC
AATGCCACAT ACGGCGGTCG CCCACTGCAG GATGTCATCC ATAACCTGCA GCGGGATCTG
CGGCAGTCCC GCCACGAGAT GGATCGCATA CTGCGCAGCG CCATGGAGCT GGGTGAGGAA
ATGCTGGAGG AAGACCAGCA GCGCATGCTC ATCGAAGGCG AATTCCAATG GCTGGACCTG
CCGGAACTGG CGGGGAGCGA ACGCCTGCGT GAACTCCTGG CCGCCGTGCG GCAGAAACGG
GATCTGGTAC ATTTGCTGGA TGAGAGTATG CGCGGTAGTG AAGTGCGCCT CTTTATCGGT
GAGGAGTCAG GCTACGCGCC GCTCAGTGAT TGCAGCGTGG TGTCGGCGCC TTACAGCGTC
GACGGGGAGG TGGTGGGAGT GCTGGGGGTG ATCGGACCGA TGCGGATGCC TTACCAGCAG
ATCATTCCGC TGGTCGACGG CACGGCGCAA CTGCTCGGCC GCGCCCTGTC GCAATCCGGC
TAG
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| Protein sequence | MDERARHLLK SLIEQHIAKG VPVGSRQLAR DAGLNISPAT VRNVMADLED EGYLISPHTS
AGRIPTHVGY RFFVDALLRV VPLSAESNRL LIHRIGFRAP DAEQVLHAAT GILSELTHMA
GFVRVPRRAT RILRHVDFIA LHEREVLAIF VTDRGDVENR LIRTEQPFAA AELAQAANCF
NATYGGRPLQ DVIHNLQRDL RQSRHEMDRI LRSAMELGEE MLEEDQQRML IEGEFQWLDL
PELAGSERLR ELLAAVRQKR DLVHLLDESM RGSEVRLFIG EESGYAPLSD CSVVSAPYSV
DGEVVGVLGV IGPMRMPYQQ IIPLVDGTAQ LLGRALSQSG
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