Gene Lferr_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2288 
Symbol 
ID6878282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2259444 
End bp2259758 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content59% 
IMG OID642790147 
ProductAntibiotic biosynthesis monooxygenase 
Protein accessionYP_002220696 
Protein GI198284375 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000787816 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATACG TCGTAGCGAA CCGGGTTCCT GTCAAGGCGG AGTATCGTGC AGAGTTTGAG 
GAGCGCTTTC GGCGCCGGGC GGGCGAGGTG GACAAACAGC CGGGCTTCGT GCGTATGGAG
ATCCTGCGTC CGGTGAGCGA TGACGGTCTG TATGTGGTGC TGACCCACTG GGTCGATCAG
GCGGCCTTCG AGGCATGGAT GAAAAGTGCC GACTTCAAGA CCGCCCACAC CAACCCGCTG
CCCAAAGAAG CTTTTGGTGA GGGCGGTGGT ATCGAGCGTC ACGAGGTGAT CATCCATTCT
GAAGTATCGC GCTGA
 
Protein sequence
MQYVVANRVP VKAEYRAEFE ERFRRRAGEV DKQPGFVRME ILRPVSDDGL YVVLTHWVDQ 
AAFEAWMKSA DFKTAHTNPL PKEAFGEGGG IERHEVIIHS EVSR