Gene Lferr_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2282 
Symbol 
ID6878276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2254590 
End bp2255327 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID642790141 
Productprotein of unknown function DUF72 
Protein accessionYP_002220690 
Protein GI198284369 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.578692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000430917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGAAAGC CGGTTTCATC GCCTTACTAC ATCGGCTGCT CCGGCTGGCA TTACGCCCAT 
TGGGTCGGGG CGTTTTATCC GCCTGGCCTG CCTTCCACAG GTCGGCTGGC CTTTTACGCC
GGGCGCTTTC ATACGGTGGA GATCAACAGC AGCTTCTATC GATTGCCCAG CGAGAAGTGC
CTGCGCGCCT GGCATGACGG CACGCCCGCA GGCTTCCTCT TCGCCCTCAA GGCTAGCCGC
TTCATCACCC ACATGAAAAA ACTCAAGGAT TCCGAGGCGT CACTGGCTCG GCTCCTGGGG
CGCGCGGAAA ACCTGGGGGA GAAACTGGGA CCCGTGCTCT TTCAACTGCC ACCCCACTGG
AGACGGAATG CCAAGCGCCT GGAGGGATTT TTACGGGTGC TGCCTTCCGG ACATCGCTAC
GCCTTCGAGA TACGCGACCC AAGCTGGCAT CATCCAGAGA TCTACGCGTT ACTCAATGCC
TATAACGCCG CCTTTTGCAT CTTCGACATC GCGGGTTTTC AATCTCCCAT CCAACTGACG
ACCGATTTCG CCTATATCCG GCTGCACGGC CCCAGCTTCG CCGCCTATGC CGGCCGTTAC
ACGACTGAGG CCCTTAGGGC TTGGGCGGCG CGCATCCGGA CTTGGGGTCT GCGCACCGTT
TATGTCTACT TCGACAATGA CCAGGCCGCC TACGCCACCC ACAATGCTTT GGAACTCATG
GGAATACTCG GGCTGTAG
 
Protein sequence
MGKPVSSPYY IGCSGWHYAH WVGAFYPPGL PSTGRLAFYA GRFHTVEINS SFYRLPSEKC 
LRAWHDGTPA GFLFALKASR FITHMKKLKD SEASLARLLG RAENLGEKLG PVLFQLPPHW
RRNAKRLEGF LRVLPSGHRY AFEIRDPSWH HPEIYALLNA YNAAFCIFDI AGFQSPIQLT
TDFAYIRLHG PSFAAYAGRY TTEALRAWAA RIRTWGLRTV YVYFDNDQAA YATHNALELM
GILGL