Gene Lferr_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2276 
Symbol 
ID6878270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2250205 
End bp2250579 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content49% 
IMG OID642790136 
Productcopper resistance protein CopC 
Protein accessionYP_002220685 
Protein GI198284364 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000193107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAGA AAGCCATTCT GAAGAATATG TTGAGTAGGT TAACCATATT GGCAGCATTT 
ACACTGGTGC CGAACGCGGC TTACGCTCAT GCCTTTCCAG ACAAGTCATC TCCAACTGTT
GGTTCAACCT TGGCAACCGC GCCGAAAAAA GTAACCATTT GGTATGATGC TTCCATTGAT
CGCTTATTCT CAAAACTCAC GGTCAAGAAT GCCCAAGGTG CGGTGGTCAG TCTGACAAGC
CATGTGTCCC GAAACCGAAT TGAGCTTTCT GCGCCACTGA AGCCACTTGT GGCTGGTAAA
TATTTCGTGT ACTGGAGCGT CGTGGCCAGT GACGGGCACC ATACTCATGG CCACTGGTCA
TTTGCGGTGA AGTAA
 
Protein sequence
MTKKAILKNM LSRLTILAAF TLVPNAAYAH AFPDKSSPTV GSTLATAPKK VTIWYDASID 
RLFSKLTVKN AQGAVVSLTS HVSRNRIELS APLKPLVAGK YFVYWSVVAS DGHHTHGHWS
FAVK