Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2264 |
Symbol | |
ID | 6878258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2239109 |
End bp | 2241955 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642790125 |
Product | ribonucleoside-diphosphate reductase, alpha subunit |
Protein accession | YP_002220674 |
Protein GI | 198284353 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000198665 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTAAAC CTACCACCCA GGCCGTCATC GGTAACCCTG CCTACGACCC TTCCGAAGCC AGTCATTACA AAGTCATTCG TCGCAACAAC GCGATGGTCA ATTTTGACGC CAGCAAGATT CATATCGCTG TGACGAAGGC CTTCCTGGCC GTGGAAGGCG GCAGCGGGGC GGCAAGCGCG CGCGTTCGTG ACCTCGTCAG CCGCCTGACG GAACAGGTGA TTGAAGCACT GAAACGGCGC CAGCCGGGGG GCGGCACCTT TCACATCGAA GACATTCAGG ATCAGGTGGA ACTGGCGCTC ATGCGTGCCG GCGAACACGA AGTCGCCAGG GCCTATGTAC TTTATCGCGA GGAGCGCGCG CGGGAACGCC GCCAGCAAGC TGCGGCGGAA ACCCCAGCCG ACGTCCCGGT TATTCGGGTC AGCTATCCGA ACGGCAGCCA GCGGGCACTG GACATGGTAC GATTGCGCGC CGTCATCGAC GAAGCCTGCA GCGGCCTGGG CACCGCCGTG TCGATAGACG CCATTCTCGG CAACACCGTC AAAAATCTCT ACGACGGTAT CAGTGAGGAT GAGTTGTTTC AGGCCCCCAT TCTGGCCAGC CGGGTGCTGA TCGAGCGCGA TCCCGCCTAC GCCTACGCCT CGGCACGTCT GCTTCTCGAC CGCGTGCGCT GGGAAGTGCT CGGTGAAGCC GCGACGCAGG CGGAGATGAC CGCACGTTAT CCCCAGTATT TCCGCGACTA TCTGCAAACC GGCATCCAGA ATGAGCTGAT CGACCCGCGC CTGGGACAGT ATGATCTGGA ACGCATCACC GCCGCGCTCC GGCCGGAGCG GGATCTGGAC TTCCAGTATC TGGGCATGCA GATTCTGTAT GACCGCTACT TCTTGCATGT ACGGGAGCGC CGCATCGAGT TGCCGCAAGC CTTCTGGATG CGGGTGGCCA TGGGTCTGGC GATGAATGAA GTCGACCGCG AAACCCACGC CATCGCCTTT TACGAAGTGC TGTCCAGCTT CGACTTCGTC AGTTCGACGC CCACCCTGTT CAACGCCGGA ACCTTGCGCC CGCAGTTGTC CAGTTGCTTC CTGACCACCG TGGGTGACGA CCTGGATGAC ATCTACGAAG CCATCAAAGA AAACGCCATG CTCTCCAAGT TCAGCGGCGG GCTGGGGAAC GACTGGACGC CGGTGCGTGC GCTGGGCTCC TTCATCAAAG GCACCAATGG CAAGTCGCAG GGCGTCGTTC CCTTCCTCAA AGTGGTCAAC GACACGGCGG TGGCGGTCAA TCAGGGCGGC AAGCGCAAAG GCGCGGTCTG CGCCTATCTG GAAACCTGGC ACATGGATAT CGAGGAATTC CTCGAACTGC GCAAGAATAC CGGCGACGAC CGCCGCCGCA CCCACGATAT GAATACCGCC AACTGGATCC CCGACCTCTT CATGGAACGC GTCGAGAACA ACGCCATGTG GACGCTGTTC AGCCCCAACG AAACACCGGA TTTGCACGAC CTCACCGGGT CGGCGTTTCG GGAGCGCTAT GAGCACTATG AGCGCATGGC GGATGCGGGC GGCATCGAGT TGTTCAAGCG CATACCAGCC ATTCATCTCT GGCGCAAAAT GCTGACCATG CTCTTCGAGA CCGGCCATCC CTGGATCACC TTCAAGGACC CCTGCAACCT GCGCAGCCCG CAGCAGCACG TTGGGGTGGT GCACAGCTCC AACCTCTGCA CCGAAATCAC CCTCAATACC AACGCCAAAG AGATTGCCGT CTGCAACCTG GGGTCCGTCA ACCTGGTATC CCATTTACGG GCAGTGGCGG ACGCCGGCGC ATTGCGCGAG GACAGCACGC CGGAAGAACT GCTCGCCATG ATGGATGGGG AAAAGTTGCA CCACACCATC CGCGTTGCCA TGCGGATGCT GGATAATGTC ATCGACATGA ACTACTACGC CGTCGCCAAG GCGCGCAACA GCAATCTGCG GCACCGGCCG GTGGGCCTGG GGCTGATGGG CTTCTCCGAT GCCCTGTTAC AGATGCGGAT TCCTTACGCT TCGGCAGCAG CCCTCGCCTT TGCCGACATC AGCCAGGAAG TCATTTCCTA CCATGCCATC GATGCATCGG CCGATCTCGC CCGGGAACGG GGCAGCTATC AGAGCTTCCC AGGGTCCCTG TGGAGTCAGG GTATCCTGCC CATCGACAGC ATCGACCTGC TCGCGGCCGG CCGTGAGCAC GGCGTGGACG TGGACCGCAG CCAGCATCTG GACTGGGCAA CACTGCGTAG CAAGGTACGG GGCGGCATGC GCAACAGCAA TTGCCTGGCC ATTGCGCCCA CCGCCACCAT CTCCAATATT GTCGGTGTCA GCCAGGGTAT TGAACCGATT TACCAGAACC TCTATGTCAA ATCCAACCTG TCCGGCGAGT TTACGGTGGT GAACAGCTAT CTGGTTCACG ACCTGAAACG CCTGGAACTC TGGGATGAGG TCATGGTCAA TGATCTGAAA TACTTCGATG GCTCGGTCAT GCCCGTAGAC CGCATTCCGG CCAGCATCAA GCCCCTGTAT GCCAACGCTT TTGAAACCGA CCCGGAATGG CTGGTGGAAG CGGCGGCGCG GCGGCAGAAA TGGCTGGATC AGGCCCAGAG TCTCAACCTC TATTTCGGCC AGCCTTCCGG CAAGAAAATT GACGAGATCT ACCGGCTGGC CTGGAAACGC GGCCTGAAGA CCACCTACTA CCTGCGCTCA CTGGGCGCCA CGGCAGCGGA AAAATCGACG GTGCAGACGG GCACCCTCAA TGCGGTCGTA TCAGGTCAAC CCAAAGCCTG CGCGATCGAC GATCCGACTT GTGAGGCCTG TCAGTGA
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Protein sequence | MSKPTTQAVI GNPAYDPSEA SHYKVIRRNN AMVNFDASKI HIAVTKAFLA VEGGSGAASA RVRDLVSRLT EQVIEALKRR QPGGGTFHIE DIQDQVELAL MRAGEHEVAR AYVLYREERA RERRQQAAAE TPADVPVIRV SYPNGSQRAL DMVRLRAVID EACSGLGTAV SIDAILGNTV KNLYDGISED ELFQAPILAS RVLIERDPAY AYASARLLLD RVRWEVLGEA ATQAEMTARY PQYFRDYLQT GIQNELIDPR LGQYDLERIT AALRPERDLD FQYLGMQILY DRYFLHVRER RIELPQAFWM RVAMGLAMNE VDRETHAIAF YEVLSSFDFV SSTPTLFNAG TLRPQLSSCF LTTVGDDLDD IYEAIKENAM LSKFSGGLGN DWTPVRALGS FIKGTNGKSQ GVVPFLKVVN DTAVAVNQGG KRKGAVCAYL ETWHMDIEEF LELRKNTGDD RRRTHDMNTA NWIPDLFMER VENNAMWTLF SPNETPDLHD LTGSAFRERY EHYERMADAG GIELFKRIPA IHLWRKMLTM LFETGHPWIT FKDPCNLRSP QQHVGVVHSS NLCTEITLNT NAKEIAVCNL GSVNLVSHLR AVADAGALRE DSTPEELLAM MDGEKLHHTI RVAMRMLDNV IDMNYYAVAK ARNSNLRHRP VGLGLMGFSD ALLQMRIPYA SAAALAFADI SQEVISYHAI DASADLARER GSYQSFPGSL WSQGILPIDS IDLLAAGREH GVDVDRSQHL DWATLRSKVR GGMRNSNCLA IAPTATISNI VGVSQGIEPI YQNLYVKSNL SGEFTVVNSY LVHDLKRLEL WDEVMVNDLK YFDGSVMPVD RIPASIKPLY ANAFETDPEW LVEAAARRQK WLDQAQSLNL YFGQPSGKKI DEIYRLAWKR GLKTTYYLRS LGATAAEKST VQTGTLNAVV SGQPKACAID DPTCEACQ
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