| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2262 |
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| Symbol | |
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| ID | 6878256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2235316 |
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| End bp | 2237241 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642790123 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_002220672 |
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| Protein GI | 198284351 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000538209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000171199 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAATG TCTTAAAAAA TGTACTATTG TGGGTGGCGA TCGGCGTTAT CCTGATGCTG
GTGTTCCAGA ACCTCAATAC GAGCAGTTCT ACCCCGGCCC AGGCCATGGA TTTTTCGACC
TTCGTGAGTA GTATCAAGCA AGGTCAGGTC GCGGATGTCA CCATCAACGG TAATCATGTG
GAAGGCAGCC TGAATTCGGG GCAGCATTTC AGCGTCTACA CCCCGGCGAA CGACACCCAG
GTTGTTCCCC AACTGTTGGC CGCAGGAGTG AAGATCTCGG TCAAGCCCCC GGAGGGGCAG
TCGCTGCTGC TCTCCATCCT CATCTCATGG TTCCCGATGT TGCTGCTGAT CGGCGTGTGG
ATATTCTTCA TGCGCCAGAT GGGTGGTGGT GGTGCCGGTG GTCGCGGCGC GATGACCTTT
GGCCGCAGCA AGGCGCGGAT GCTGACCGAG GAAAACAACA AGGTCACTTT TGCCGATGTG
GCAGGTATTG AAGAAGCCAA GGACGAACTG GCCGAGATTG TTGAATTCCT GCGCGATCCG
CAGAAATTTC AACGCCTCGG CGGACGTATT CCCAAGGGTG TGCTGCTCAT GGGTTCGCCG
GGTTCCGGTA AGACCCTGCT GGCGCGTGCC ATCGCCGGAG AGGCGCGGGT ACCATTCTTC
TCCATCTCCG GCTCCGACTT CGTGGAAATG TTTGTTGGCG TGGGTGCATC GCGGGTTCGC
GACATGTTTG AGCAGGCCAA AAAGCATGCC CCCTGCATTA TCTTCATTGA CGAAATCGAC
GCAGTGGGTC GTCAGCGTGG CGCCGGCCTG GGTGGCGGTA ATGATGAACG CGAGCAGACC
CTGAATCAGT TGCTGGTGGA AATGGATGGG TTCGAGGGCA CCGAGGGCAT CATTGTCGTC
GCGGCTACCA ACCGTCCGGA TGTGCTGGAT CCGGCGTTGT TGCGGCCCGG CCGCTTCGAC
CGGCAGGTCA CCGTTCCGTT GCCGGACATT CGCGGGCGCG AGCAGATTCT GCAGGTACAC
ATGCGCAAGG TGCCGGTTGC CCCTGACGTG GACGCCAAGG TCATTGCCCG CGGTACCCCT
GGCTTCTCCG GCGCCGATCT GGCCAACCTG GTCAATGAAG CGGCGCTGAT GGCGGCTCGT
AGAAGCAAGC GTCTGGTGGA CATGATTGAC TTTGAAGATG CCAAGGACAA GGTCATGATG
GGCGCCGAAC GCAAGTCGGT GGTGATGAGC GACAAACAGC GTGAGACCAC GGCCTATCAC
GAGTCCGGTC ATGCCGTGGT GGCCAAGCTG CTTCCGGGCA CGGACCCCGT GCATAAAGTC
ACCATTATCC CGCGTGGCCG GGCCTTGGGG CTCACCATGC AGTTGCCGAC GGAGGATCGC
TTCAACTACG AGCGTCAGGA AATTCTCAAC AATATCTCCA TTCTCATGGG TGGACGCATC
GCTGAAGAAG TATTCCTCAA CCAGATGACG ACCGGCGCAG GTAATGACAT CGAGCGTGCC
ACCGACCTGG CGCGGCGCAT GGTGACCCAG TGGGGCATGT CCGGCATCGG GCCGATGGTC
ATTGGTGAAA AAGAGGAAGA GGTATTCATT GGCCGGGAAA TGACCAAGCA CAGCAATATC
TCGGAGCAGA CGGCGAGGAC CGTGGACGGA GAGGTACGCG ATATTATTCA GGAGCGTTAC
GGTATTGCCC GTAAACTGAT CGAAGAAAAT CGCGACAAGG TCGAGGCCAT GGCCCGGGCT
CTGCTGAAGT ATGAGACATT GGACGCAAAA CAGGTGAGCG CTATCATGGC GGGGCATGAT
CCGCAGCCGC CGGTGGAAGG GGGAACGGGA AGCTATCCTT CCACTCCCGA CGGCAATGTC
ACAACGGCCG ACAAATCCGG CGGACAGTCG TTGCCCAGCC TCAACCCCGG CGAACACCCG
GTTTGA
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| Protein sequence | MNNVLKNVLL WVAIGVILML VFQNLNTSSS TPAQAMDFST FVSSIKQGQV ADVTINGNHV
EGSLNSGQHF SVYTPANDTQ VVPQLLAAGV KISVKPPEGQ SLLLSILISW FPMLLLIGVW
IFFMRQMGGG GAGGRGAMTF GRSKARMLTE ENNKVTFADV AGIEEAKDEL AEIVEFLRDP
QKFQRLGGRI PKGVLLMGSP GSGKTLLARA IAGEARVPFF SISGSDFVEM FVGVGASRVR
DMFEQAKKHA PCIIFIDEID AVGRQRGAGL GGGNDEREQT LNQLLVEMDG FEGTEGIIVV
AATNRPDVLD PALLRPGRFD RQVTVPLPDI RGREQILQVH MRKVPVAPDV DAKVIARGTP
GFSGADLANL VNEAALMAAR RSKRLVDMID FEDAKDKVMM GAERKSVVMS DKQRETTAYH
ESGHAVVAKL LPGTDPVHKV TIIPRGRALG LTMQLPTEDR FNYERQEILN NISILMGGRI
AEEVFLNQMT TGAGNDIERA TDLARRMVTQ WGMSGIGPMV IGEKEEEVFI GREMTKHSNI
SEQTARTVDG EVRDIIQERY GIARKLIEEN RDKVEAMARA LLKYETLDAK QVSAIMAGHD
PQPPVEGGTG SYPSTPDGNV TTADKSGGQS LPSLNPGEHP V
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