Gene Lferr_2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2261 
Symbol 
ID6878255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2234486 
End bp2235262 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID642790122 
Productdihydropteroate synthase 
Protein accessionYP_002220671 
Protein GI198284350 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00525567 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000957493 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAGTGC TTAATATCAC TCCTGATTCC TTTTCGGATG GCGGTACCTA TCTGTCTGCG 
GATGCCGCCC TCGTGCGCGC CAAACGGATG TGGGAGGAGG GTGCCGATAT CATCGATATC
GGGGCGGAAT CCACCCGCCC CGGGGCGCCG GCGGTGACGC AGGAGGAAGA GTTGCGGCGA
CTTCTGCCGG TGTTGGAGGC GGTGGCGGCA GAGGTGCCGC TGCCCATTTC CATTGACACC
AGCAAAGCCG CTGTTATGCG TGCAGCCTGG TCTCTGGGCG CGGGGCTCAT GAATGATGTG
ACCGCGTTGC GTGCTGATCC GCTGTCACTG GAGACCATCG CAGGGTTGGG TGTTCCCGTC
TGTCTGATGC ACATGCGGGG TACCCCGCAG AATATGCAGG AGAACACCCA TTACCGCGAT
GTCGTGGCAG AGGTGAAGGA TTTTCTGTCC GAGCGTGTAG CACAGTGTGT CGCCGCAGGC
ATTCCCCGGC ACCATCTGCT GGTAGATCCC GGCTTTGGTT TTGCCAAGGA TCTGGAAGCA
AACCGTACTT TGCTGCGCCA TCTGGATGAC CTTGCGTCCC TGGAGCTGCC GCTGCTTGTG
GGTCTTTCCC GCAAACGCAT GATCGGTGAG CTCTCTGGTG TAGAATCGGC TTCTGAGCGT
GTGGCGGGCA GTGTTGCCGC GGCACTTTGG GCCGTGTCGC GCGGCGCCAG CATCGTACGT
GTCCACGATG TCGCAGAAAC GGTGCAGGCA TTGGGGGTCT GGCGCGGATT GGCTTGA
 
Protein sequence
MGVLNITPDS FSDGGTYLSA DAALVRAKRM WEEGADIIDI GAESTRPGAP AVTQEEELRR 
LLPVLEAVAA EVPLPISIDT SKAAVMRAAW SLGAGLMNDV TALRADPLSL ETIAGLGVPV
CLMHMRGTPQ NMQENTHYRD VVAEVKDFLS ERVAQCVAAG IPRHHLLVDP GFGFAKDLEA
NRTLLRHLDD LASLELPLLV GLSRKRMIGE LSGVESASER VAGSVAAALW AVSRGASIVR
VHDVAETVQA LGVWRGLA