Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2254 |
Symbol | |
ID | 6878247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2228869 |
End bp | 2230122 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642790114 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_002220664 |
Protein GI | 198284343 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000154911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGAAA TCAATAACTT CACCATGAAC TTCGGGCCGC AGCATCCGTC TGCCCACGGT GTGCTGCGTC TGGTACTGGA ACTGGACGGT GAAGTGATCG AGCGCGCCGA TCCCCACATC GGTCTGCTGC ACAGGGCTAC CGAGAAGTTG GCGGAAAACA AGACCTATCT GCAGAACCTG CCTTATATGG ATCGGCTCGA TTATGTGTCG ATGCTGTGCA ACGAACACGC GTACTGTCTG GCGGTAGAGA AACTGCTCGG CGTTGAAGTG CCGGTTCGTG CCCAGTATAT CCGTACCCTG TTCGACGAGA TTACCCGCAT TCTCAATCAT CTGCTCTGGT TGGGTGCCTA TGCCCTGGAC GTCGGTGCCA TGAGCGTCTT TCTTTACTGC TTCCGCGAGC GGGAAGACCT CATGGATGTC TATGAAGCGG TATCCGGTGC GCGCATGCAT GCCGCCTACT ATCGCCCGGG GGGGGTGTAC CGCGACCTAC CTGCCCAGAT GCCACAGTAC CAGCCGTCTC CTTACCGTGA CGCCCGGCGC CTGCAAGAGC TCAATGCCAA CCGTCAGGGC AGCATGCTGG ATTTCATAGA GGACTTCGCG CGCCGTTTCC CCACCTACGT GGACGAGTAT GAAACCCTGC TGACGGACAA CCGGATCTGG AAGCAGCGCA CGGTGGGTAT CGGTGTGGTG GGGCCGGAAC GGGCCATTCA ACTGGGCTTC ACTGGCCCCA TGCTGCGCTC TTCCGGTGTG GCTTGGGATC TGCGGCGTAC CCAACCCTAC GCAGCGTATG CCGATCTGGA TTTTGATATC CCGGTGGGTA AAACCGGGGA CTGTTATGAT CGCTATCTGG TCCGCGTCGC GGAGATGCGG CAGAGCAACC GGATCATTGT CCAGTGTGTG GATTGGCTGC GCAAGAATCC TGGCCCGGTG ATTACCGATG ATTTCAAGAT TGCCGCGCCG TCCCGCGAAG AGATGAAAAC CAGCATGGAG GCGTTGATTC ATCACTTCAA GCTATTCTCC GAAGGGATGG CGGTTCCTGC GGGTGAAGTC TATGCCGCGG TGGAGGCTCC CAAGGGGGAA TTTGGCATTT ATATGATTTC GGATGGTGCC AACAAACCCT ACCGGATGAA AATCCGGGCA CCCGGATTCC CGCATCTCGC CGCTATGGAC GAGATGGCCC GGGGACATAT GATCGCGGAC GTGGTGGCTA TTTTGTCCAC CATGGACATT GTTTTTGGCG AGATCGACAG GTAA
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Protein sequence | MPEINNFTMN FGPQHPSAHG VLRLVLELDG EVIERADPHI GLLHRATEKL AENKTYLQNL PYMDRLDYVS MLCNEHAYCL AVEKLLGVEV PVRAQYIRTL FDEITRILNH LLWLGAYALD VGAMSVFLYC FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPAQMPQY QPSPYRDARR LQELNANRQG SMLDFIEDFA RRFPTYVDEY ETLLTDNRIW KQRTVGIGVV GPERAIQLGF TGPMLRSSGV AWDLRRTQPY AAYADLDFDI PVGKTGDCYD RYLVRVAEMR QSNRIIVQCV DWLRKNPGPV ITDDFKIAAP SREEMKTSME ALIHHFKLFS EGMAVPAGEV YAAVEAPKGE FGIYMISDGA NKPYRMKIRA PGFPHLAAMD EMARGHMIAD VVAILSTMDI VFGEIDR
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