| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2250 |
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| Symbol | |
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| ID | 6878243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2223716 |
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| End bp | 2224741 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642790110 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_002220660 |
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| Protein GI | 198284339 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.6256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000133524 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATGATT TTCAGAGTAC GGCGTGGTGG GCGATCCTCT GGTCGATCAT CAAGATTGTC
GTCGTCTTGG TGCCACTACT GTTGGGTGTG GCCTATCTGA CCCTGGCCGA GCGCAAGGTG
ATTGGTTATA TACAGGTACG TCTGGGCCCC AATCGCGTGG GCTTCAAGGG CTCGTTGCAG
CCGATCGCCG ATGCGGTCAA GCTGATGTTC AAGGAAGTGA TCATCCCGAC CAACGCTAAT
CGGTTTCTGT TTCTGGCGGC ACCGGTGCTG GCTTTCGTGC CGGCAATGCT GGTCTGGGCG
GCCATTCCTT TCGGCCCGGA TATGGCCATC TCCCATATGA ACGCCGGTCT CCTTTATGTG
CTGGCCATCG CCGGCCTGGG GGTATACGGC ATCATCGTTG CGGGCTGGGC GTCCAATTCC
AAATATGCCT TTCTGGGGGC CATGCGGGCG GCGGCTCAGT TGGTGGCTTA CGAAATTGCC
ATGGGCTTTG CTCTGGTGGG ATTGTTGATG GCTGCCCAGA CCCTGAATCT CACCAAAATC
GTGGAAGCCC AGGCGGGAGG CGGTTTCTGG TCCTGGTATT GGCTGCCGTT ATTTCCGTTC
TTTCTGGTGT ACTTTATTTC CGGCGTGGCC GAAACCAACC GCGCACCTTT TGACGTAGCG
GAAGGCGAGT CGGAAATTGT GGCGGGATTT CATGTGGAGT ATTCCGGGAT GGCCTTCGCG
CTGTTCTTTC TGGCGGAATA TGCCAATATG ATTTTTGTCT CCATGTTGAC GACGGTGCTC
TTTCTCGGTG GCTGGTATGC GCCGATCAAT ACACCATGGC TCACCTGGAT ACCGGGTGTC
GTCTGGTTAT TGCTGAAAAC CGCTTTCCTG CTGTATGTGT TTTTATGGAT TCGCGCCACT
TTTCCCCGTT ATCGCTATGA CCAGATCATG CGTTTGGGCT GGAAGGTGTT TATCCCGGTG
ACCATTGCCT GGATCGTCGT AGTCGGCGTT GCTCTGGAAA CGCCCCTGCG CGTCATTTTG
CGCTGA
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| Protein sequence | MHDFQSTAWW AILWSIIKIV VVLVPLLLGV AYLTLAERKV IGYIQVRLGP NRVGFKGSLQ
PIADAVKLMF KEVIIPTNAN RFLFLAAPVL AFVPAMLVWA AIPFGPDMAI SHMNAGLLYV
LAIAGLGVYG IIVAGWASNS KYAFLGAMRA AAQLVAYEIA MGFALVGLLM AAQTLNLTKI
VEAQAGGGFW SWYWLPLFPF FLVYFISGVA ETNRAPFDVA EGESEIVAGF HVEYSGMAFA
LFFLAEYANM IFVSMLTTVL FLGGWYAPIN TPWLTWIPGV VWLLLKTAFL LYVFLWIRAT
FPRYRYDQIM RLGWKVFIPV TIAWIVVVGV ALETPLRVIL R
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