| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2246 |
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| Symbol | |
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| ID | 6878239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2220301 |
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| End bp | 2222283 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642790106 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_002220656 |
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| Protein GI | 198284335 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00025541 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGTTTT TTGACTGGTT GAACGCCTTC CCTCCCCTCG CCGTGTATCT GGTTATCCCC
GTGGCGCCAC TGGTGGGTGC ACTCGTGGCC GGTTTCTGGG GCTGGAGGCT CCGGGATCAT
GCGCATTGGG CGCCGATCAT CGGGGTGGCC ATTGCTTTCT ATCTCTCGTT GGCCGTGCTC
TGGCAAACCG GTCACGGTAT AACCTTTTAC GGAGATGTCT ATACCTGGGC GGTATTGGGT
CATCTGCCGG TATCCGTCGG ATTTGACATC GACAGCCTGA CGGCATTGAT GCTGGTCGTT
GTCACTTTTG TATCTCTGAG CGTGCATCTG TATACCGTTG GTTATATGCA CGGCGATCCG
GGTTACGCGC GTTTTTTCAG CTATATTGCC TTGTTCACGT TCAGTATGAT CATGCTGGTG
ATGAGCAATA ATTTTCTCCA GCTCTTTTTT GGCTGGGAAG CGGTGGGTCT GGTTTCCTAC
CTGCTCATCG GCTTCTGGTT TCAGCGTGAA AGTGCCAATG TCGCCGCGAT CAAGGCATTT
ATCGTCAACC GTGTCGGTGA TTTCGGCTTT TTGATCGGTA TTGCCGCAGT ATACCACTAT
TGTGGCAGTC TGGATTATCG TACGGTATTC GCGGCCGTAC CTCATCTGAT CGGACAAACA
CTGGAAATCA TACCGGGACA TCCCTGGAGT GTGCTGACCT GGATTGCCCT GCTGCTGTTT
GTCGGCGCCA TGGGCAAATC CGCGCAAGTG CCTTTACATG TTTGGTTGCC GGAATCCATG
GAGGGCCCGA CCCCCATCTC CGCCCTGATC CATGCGGCGA CCATGGTCAC GGCGGGTATT
TTTATGGTCG CACGGATGTC GCCGATTTTT GAACAGTCCG CGACGGCCCT TTCGGTGGTG
CTGATCATCG GCGCGGTAAC GGCGTTCTTT ATGGGGCTCG TCGGTCTGGT GCAGAATGAT
ATCAAGCGTA TCATCGCTTA CTCGACCATT TCCCAGCTGG GTTACATGAC GGCGGCGCTG
GGTGCTTCCG CCTTCTCCGC GGCAATTTTT CACCTGATGA CTCACGCCTT CTTCAAGGCC
TTGCTATTTC TGGCCGCAGG TTCAGTGATC CATGCGATGT CCAACGAGCA GGATATCCGC
AAAATGGGCG GGCTGCGCAA GGTCATGCCC ATCACCTATA TCACCTTTCT GATCGGCAGC
CTGTCGTTGT CCGGTATTCC GCCCTTTGCC GGATTCTTCA GCAAGGACCT CATTATCGAG
GCAGTAGGGC TCTCTACCCT TCCCGGAGCG GGCTGGGCGG AATGGATGCT GGTGGCTGGC
GCCTTCGTCA CGGCGCTCTA TACCTTCCGG ATGTTTTTCC TGGTCTTCCA TGGCGCCCCG
CGCATGGATG CCCACACCCG CGCACATCTG CACGAGTCAC CCTGGGTGAT TACCGTGCCC
CTGATTGCGC TGGCGATTCC CGCGGTTTAC GCGGGTTGGG CATATATTGG GCCCGTCGGC
CTGGGGCACT TCCTGGATTC CTCCCTGGTC GTTGCCCCGC AGTGGAATAC CATTGGGGAG
ATTCGTGCCC ACTGGCAGGG TGCGGGCGCG TTCGTGCTGC ACAGTGTGGA GACCGTACCG
TTCTGGTTGG CGCTCTTGGG TATTGCCGTC GCTGCCTGGT TCTACTGGTT GCGGCCGGGC
CTGCCTGAAG CGCTGACCCG GTTTCTCAGT CCCATTGTCT GGGCGCTGCA GCGCAAATAC
GGGTTTGATG CCTTCAACCA GACGGTACTG GTACGCGGCG TCTTACAGCT TGGCGCTTTG
TTCTGGCACG TGGGCGACGA ACGCCTGATC GACGGCATCA TGGTCAACGG TACGGCCCGT
GAAATCGGTA AGGCGGCATT ATCCTGGCGA CGTGTCCAGA CGGGTTATAT TTACCACTAT
GCTTTCGCAA TGATTATCGG GTTGATTCTG CTCATGAGTT ATTTTGTGGT CTGGAGAGGA
TAA
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| Protein sequence | MWFFDWLNAF PPLAVYLVIP VAPLVGALVA GFWGWRLRDH AHWAPIIGVA IAFYLSLAVL
WQTGHGITFY GDVYTWAVLG HLPVSVGFDI DSLTALMLVV VTFVSLSVHL YTVGYMHGDP
GYARFFSYIA LFTFSMIMLV MSNNFLQLFF GWEAVGLVSY LLIGFWFQRE SANVAAIKAF
IVNRVGDFGF LIGIAAVYHY CGSLDYRTVF AAVPHLIGQT LEIIPGHPWS VLTWIALLLF
VGAMGKSAQV PLHVWLPESM EGPTPISALI HAATMVTAGI FMVARMSPIF EQSATALSVV
LIIGAVTAFF MGLVGLVQND IKRIIAYSTI SQLGYMTAAL GASAFSAAIF HLMTHAFFKA
LLFLAAGSVI HAMSNEQDIR KMGGLRKVMP ITYITFLIGS LSLSGIPPFA GFFSKDLIIE
AVGLSTLPGA GWAEWMLVAG AFVTALYTFR MFFLVFHGAP RMDAHTRAHL HESPWVITVP
LIALAIPAVY AGWAYIGPVG LGHFLDSSLV VAPQWNTIGE IRAHWQGAGA FVLHSVETVP
FWLALLGIAV AAWFYWLRPG LPEALTRFLS PIVWALQRKY GFDAFNQTVL VRGVLQLGAL
FWHVGDERLI DGIMVNGTAR EIGKAALSWR RVQTGYIYHY AFAMIIGLIL LMSYFVVWRG
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