Gene Lferr_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2240 
SymbolrplT 
ID6878232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2214017 
End bp2214376 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content57% 
IMG OID642790099 
Product50S ribosomal protein L20 
Protein accessionYP_002220650 
Protein GI198284329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00478573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00537539 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAGAG TAAAACGTGG CGTAACCGCC CATGCACGGC ACAAGAAAGT TCTGGCCCGT 
GCCAAGGGCT TTCGTGGCCA GCGCAAGAGC AATTATCGCA TTGCCCATCA GGCGGTGATG
AAGGCTCTGA CCTATGAGTA TCGTGATCGC CGGACCAAGA AACGCGATTT TCGCAGTTTG
TGGATTGTGC GTATCAATGC CGCGGCACGT TCCGAGGGCG TGACCTACAG CCGTTTCATG
AATGGCTTGT TGCGCGCGGG TATCCAGCTT GACCGCAAGG TGCTGGCCGA CATAGCCGTA
CGTGACAAGG CGGCCTTCTC CCGTCTCGTT GAGGTGGTCA AGGGCCAGTT GGCAGCCTGA
 
Protein sequence
MSRVKRGVTA HARHKKVLAR AKGFRGQRKS NYRIAHQAVM KALTYEYRDR RTKKRDFRSL 
WIVRINAAAR SEGVTYSRFM NGLLRAGIQL DRKVLADIAV RDKAAFSRLV EVVKGQLAA