Gene Lferr_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2239 
SymbolpheS 
ID6878231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2212974 
End bp2213996 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content59% 
IMG OID642790098 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_002220649 
Protein GI198284328 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0303215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00654895 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTTTC AATCCATGGC CTCCATCGCG GAGGCCGCCC GGGAAGTCGC GGCGGCCTCC 
GACCTGAACA CCCTGGAACA GATCCGTCTG CGGTGGCTCG GTAGGAAGGG CGTTCTTACC
GAGGCAATGC AGCAACTCGG GCAGTTGTCG CCCGAAACGC GGCGGGAAGC AGGGCAGTTG
CTCAACGAGC GCAAGTCCGA GATACAGTCG CTTTTGCAGG AACGCAAGGC AGAGCTTGAA
GCTGCGGCTA TTCATGCACG TCTGCAGCAG GAACGGCTGG ATGTGACGCT GCCGGGACGG
CGGGAAGCGT GTGGTAGTGC GCATCCCATT CGTCAGACTC TGGAGTGGAT AGAGCATTAT
TTTTTCGGAT TGGGTTTTGA AACCAGCGAT GGCCCCGAAA TCGAAGACGA TTATCACAAC
TTCGCCGCAC TCAATATTCC GGAAGACCAC CCTGCACGGG CGATGCATGA CACCTTTTAT
CTGGACGCAA CACGTCTTTT GCGCACCCAG ACGTCGACAG TTCAGATCCG GTTTCTGGAA
TCCCATCAAC CGCCCCTGCG CATGATCGCC ACCGGCAGGG TATACCGGCG CGACTCAGAT
ATCACCCATA CGCCGATGTT CCACCAGGTG GAGGGCTTGC TGCTGGACGA ACGGGCCAGT
TTCGCCGATT TGCGCGGTTT GCTCTCCGAT TTTCTTCACG GGTTTTTCGC AAAGCCGGAT
CTCCCGGTAC GCTTCCGTCC CTCTTACTTT CCTTTCACGG AGCCTTCCGC TGAAATTGAT
ATCGGCTGCG TCATCTGCGG CGGTTCCGGC TGCCGGGTCT GCAAGCAGAC CGGCTGGCTG
GAGGTGCTGG GCTGCGGTAT GGTGCATCCG GCGGTGTTGG CCGGTGCCGG TGTCGATGGC
GAGCGTTTCA GCGGCTTTGC CTTCGGGATG GGTGTCGAGC GTCTCACCAT GCTGCGTTAC
GGGGTGAATG ATCTGCGTCT CTTCTTCGAG AACGATCTGC GCTTCCTCAA ACAGTTTTCC
TGA
 
Protein sequence
MSFQSMASIA EAAREVAAAS DLNTLEQIRL RWLGRKGVLT EAMQQLGQLS PETRREAGQL 
LNERKSEIQS LLQERKAELE AAAIHARLQQ ERLDVTLPGR REACGSAHPI RQTLEWIEHY
FFGLGFETSD GPEIEDDYHN FAALNIPEDH PARAMHDTFY LDATRLLRTQ TSTVQIRFLE
SHQPPLRMIA TGRVYRRDSD ITHTPMFHQV EGLLLDERAS FADLRGLLSD FLHGFFAKPD
LPVRFRPSYF PFTEPSAEID IGCVICGGSG CRVCKQTGWL EVLGCGMVHP AVLAGAGVDG
ERFSGFAFGM GVERLTMLRY GVNDLRLFFE NDLRFLKQFS