Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2238 |
Symbol | |
ID | 6878230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2210565 |
End bp | 2212964 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642790097 |
Product | phenylalanyl-tRNA synthetase, beta subunit |
Protein accession | YP_002220648 |
Protein GI | 198284327 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.39329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0221267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTCA GTGTTCAGTG GCTTCGTGAA TTGCTCCAAA TTTCCTGGGA TACGGAGGAG ACCGCCCGGC GTCTGACCAT GGGCGGTATC GAGGTGGAGG CGATTGAGGA TGCCGCGCCG TCTTTTCGCG GAGTGGTCGT CGCCGCCGTG CGATCCGTGG CACCCCATCC GCAGGCCGAT AAGCTGCGGG TGGCAGAGGT GGATGCGGGG GACGGACGGC TACGCACGAT TGTCTGTGGG GCGGACAACC TGGCAGCAGG TCAGCGGGTG CCTCTGGCCC TCCCCGGTGC ATTGCTCCCT GGAGAACACT GCATCGCCAC ATCTGTGCTG CGCGGGGTAT CCTCGGAAGG AATGCTTTGT GCGGCTGCGG AGCTGGGGAT CGATGACGGC AGCAGCGGTT TGCTGGTTCT GGATGCGGAT GCGCCGGTGG GAGCCGACCT GCGCGCTTAC CTCGGTCTGG ATGACCAGAT ACTGACCCTG GGGATTACTC CGAATCGTGG CGATGCGCTG TCCGTCGCTG GCGTCGCCAG GGACTTGTTT GCCCTCGGGG CGGAAGCGTT GTCCCTCCCC ACGGCGGCTA TCCCGGAACC GGCATGGGCG ATCGTGCGCC CGGGCGAAGT GGTTCCCGGT AATGGAGGCT TTGCCCCGCA TATTGCCGCA GACGCGCAAA ACGCCTGTCG TTCCTACACC GTCCTATGGA TAGAGGGTGT TCCGGAACGG TTGCCGGACT ATTTGCGTGA GCGTCTGCGT CGGGCAGGGC AGCGTTGTAT CCATCCCGTA GTGGATCTAC TGAATCTGCA AATGCTCGAA ACGGGACAGC CTCTACATGC CTTTGACGCA GAAGCTCTGC AAGGGAATCT CACCGTGCGC TGGGCGCAGA TTGGGGAGAC TCTCGATGCT CTGGATGGCC GCGACTTGCC GCTGGAATCC GATATGTTGG TGATTGCGGA CGACGCGGGC CCGGTGGCTT TGGCGGGTAT TATTGGTGGG CGGCGCACTG CGGTGACAGC ACAGACGCGT TCCATTGTCC TGGAGTCCGC TTTCTTCCAG CCCGGGGCTA TCCAGGGGCG CGCACGCCGC CTGGGCCTGC AGACGGATGC TGCCATGCGC TTTGAACGCG GCGTCGATTT CACCTTGGGG CCGGTGATGG CCACCCGTAC CTTGCAGCTT TTCGTCACGT TAGGTACGGC GCGTTTGCGA ACAGAACGAT CCTGCACCGT TCTGGGTCAG TTGCCGGAGC ATCGGCCGAT CCCCTTGCGC CGTGCCCGAC TGGCACGCAT CCTGGGAATG GATTACGAGG ATGACGTGGT CGAAACGGCG CTCACTCGTC TGGGGCTGCA TGTCAACAGG GTCCCCGATG GCTGGCAGGC GATTCCCCCG AGTCACCGCT TTGATCTGCG CATCGAGGTG GATCTGATCG AAGAGGTGGG ACGGATCTAT GGTTATGAGC GATTGCCCGC CCACCGCCCT GAGGGCATCC TGCAACCCCT GCCCATGACG CGGGGACCGC AGGCAGCCAC TTTACGCAGT GTTTTGCAGG CGCGTGATTA TCATGAGGTG ATCACCTACA GTTTTATCTC CCGTCAGGCG CAACATCTGT TCACGCCGGA TGCCGACGCG CCAGCGCTGC TCAACCCACT ATCCGCAGAT TTGGCTGTCA TGCGCGCCAG TCTTTGGCCG GGTTTGATGC AGGTGCTTCA ATTCAACATG AAACGGCAGC AGGAACGAGT ACGCATTTTT GAACTGGGGC GCGTATTTTC CGCCAACGGA CAGCGCCTCG TCCTGGGCGG CTGTATAGTC GGGACAGCGG ATCGGGAAAG CTGGGCGGAA CCCCTGCGCG CGGTTGATTT CTATGATCTG AAAGGCGACG TGAGTGCTTT GCTCGCGCTT TGGCCGGGTA CGGACTTTAG CTTCCGGCCG CTGGACGCCT ACCCGGCCCT GCATCCGGGA CAGGCTGCAG AAATTTGTGT GGAAGATCGG CGGGTGGGCG TGCTCGGTGC GCTTCATCCA ACCCTGGTCG CAGAGTATGA CCTTGACAAG TCACCGTTTT TCTTCTACTT GGATGTGGAG TGGCTGGGTA ATCTGACGAG CATTTCCAGG TTTTCATCCC TGTCGCCATT TCCGGCGTTG CGGCGGGATA TCGCGTTGGT TATCCCGAAT GACATACTGG CAGGAACGGT ACTTGATACC ATGCGGGCCG CTGCATCGGG TATTGTGCGG AGCATCACCA TTTTTGATCG CTATCAGGGT TCTTCCCTGG TGGCGGGAAC GTACAGTCTG GCTTTTGCAC TGCTCCTTCA GGACGTGGGG CGGACGCTGA CGGATACAGA GGTACAAGCA GAAATGGACC GGTTGCTGGT TGCCGTGCGG CAACTCGGTT CCATCGAACT CAGGGCATAG
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Protein sequence | MRVSVQWLRE LLQISWDTEE TARRLTMGGI EVEAIEDAAP SFRGVVVAAV RSVAPHPQAD KLRVAEVDAG DGRLRTIVCG ADNLAAGQRV PLALPGALLP GEHCIATSVL RGVSSEGMLC AAAELGIDDG SSGLLVLDAD APVGADLRAY LGLDDQILTL GITPNRGDAL SVAGVARDLF ALGAEALSLP TAAIPEPAWA IVRPGEVVPG NGGFAPHIAA DAQNACRSYT VLWIEGVPER LPDYLRERLR RAGQRCIHPV VDLLNLQMLE TGQPLHAFDA EALQGNLTVR WAQIGETLDA LDGRDLPLES DMLVIADDAG PVALAGIIGG RRTAVTAQTR SIVLESAFFQ PGAIQGRARR LGLQTDAAMR FERGVDFTLG PVMATRTLQL FVTLGTARLR TERSCTVLGQ LPEHRPIPLR RARLARILGM DYEDDVVETA LTRLGLHVNR VPDGWQAIPP SHRFDLRIEV DLIEEVGRIY GYERLPAHRP EGILQPLPMT RGPQAATLRS VLQARDYHEV ITYSFISRQA QHLFTPDADA PALLNPLSAD LAVMRASLWP GLMQVLQFNM KRQQERVRIF ELGRVFSANG QRLVLGGCIV GTADRESWAE PLRAVDFYDL KGDVSALLAL WPGTDFSFRP LDAYPALHPG QAAEICVEDR RVGVLGALHP TLVAEYDLDK SPFFFYLDVE WLGNLTSISR FSSLSPFPAL RRDIALVIPN DILAGTVLDT MRAAASGIVR SITIFDRYQG SSLVAGTYSL AFALLLQDVG RTLTDTEVQA EMDRLLVAVR QLGSIELRA
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