Gene Lferr_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2236 
Symbol 
ID6878228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2209829 
End bp2210281 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content56% 
IMG OID642790095 
Producttranscriptional regulator, MerR family 
Protein accessionYP_002220646 
Protein GI198284325 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.039823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCGA ACCAGACAAC GCATAGGGAA AAGGCGAGCA AAGACCTCGC TCCGCTCCCG 
GATATACCGG AAAAACGGTA TTTCTCCATC AGCGAGGCCG CCCTGCTCTG CGGGGTGAAG
GCACATGTGC TGCGTTACTG GGAACAGGAG TTTCCTCAGC TTAGTCCACT CAAAAGAAAG
GGTAACCGGC GTTATTACCA GCGCCACGAT CTGTTGTTGG CGAGACAGAT TCGTACCCTT
CTCTATGGAG AAGGGTACAC CATCCACGGA GCGCGGGAGC GTTTGCAGGG GCTGGCGCGC
TTTCCGCACC GCGAGTCCCC GGATAAAAAT CAGCTGCAAC TGAGTCTGGA CGTCGTGGGC
TCGTCCATCA GTGTTATCGA GGTCCGCAAA CGCTGGCACT ACCTGCGCCA GGAGTTATCG
GAATTGTTGG ATTTATGCGG TCGCAGGCAT TGA
 
Protein sequence
MVANQTTHRE KASKDLAPLP DIPEKRYFSI SEAALLCGVK AHVLRYWEQE FPQLSPLKRK 
GNRRYYQRHD LLLARQIRTL LYGEGYTIHG ARERLQGLAR FPHRESPDKN QLQLSLDVVG
SSISVIEVRK RWHYLRQELS ELLDLCGRRH