| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2225 |
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| Symbol | |
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| ID | 6878216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2199359 |
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| End bp | 2200900 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642790083 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002220635 |
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| Protein GI | 198284314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.324069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.905076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAG CTAAAGAACA TTTGATCATT TTCGACACCA CCTTGCGCGA TGGCGAGCAA
TCGCCGGGCG CGGCCATGAC GCGCGACGAG AAACTGCGCA TCGCCAAGGC CCTGGAGCGC
TTGCGCGTGG ACGTCATCGA GGCGGGCTTC CCCGCCGCCA GCAACGGCGA TTTTGTTGCA
GTGCAAGCGA TTGCTGCTGC GGTGAAGGAC AGCCGTATCT GCGCTCTGGC CCGGGCCCGG
GACGAGGACA TCCGCCGCGC CGGGGAGGCC ATCGCCGGGG CGGCGGCGGG GCGCATCCAT
ACCTTCATCG CCACCAGTCC GGTACACATG CAGGCTAAAT TGCGCATGTC CCCCGACGAG
GTCCTGGAAC GGGCGGTGGC GGCCGTGAAG CTCGCCCGGG AGTATTGCGA CGACGTGGAG
TTTTCGCCGG AGGATGCCGG GCGGTCGGAG GAGGATTTTC TCTGCCGGGT CATCGAGGCG
GTGATCGACG CCGGGGCGCG CACCATCAAT ATCCCGGACA CGGTGGGTTA CAACCTTCCG
GACCGCTTTG GGCAGCTCGT CGCCAATTTG CGCAGGCGCG TGCCCAATGC TGACCGGGCG
ATCTTTTCGG TGCATTGTCA TAACGATCTG GGCTTGGCCG TGGCCAACTC CTTGTCGGCC
GTCCTCCACG GCGCCCGCCA GGTGGAGTGC ACCATCAACG GTCTGGGCGA ACGGGCGGGC
AATGCCGCCC TGGAGGAGAT CGTCATGGCG GTGCGCACCC GCGCCGATGT CTTCTCCTGC
GACACCCGCA TCGACGCCAC CCAGATCGTG CCCACCAGCA AGCTGGTGTC CACCATCACC
GGTTTCCCGA TCCAGCCCAA CAAGGCCATT GTCGGGGCCA ACGCCTTTGC CCACGAGTCG
GGCATCCATC AGGACGGTGT CCTCAAGCAC CGGGAAACCT ACGAGATCAT GCGCGCCGAG
GACGTGGGCT GGGCGGCCAA CCGCATGACC CTGGGCAAGC TCTCGGGCCG GGCGGCGGTG
CGGGCGCGCC TGGAGGCCTT GGGCATCCAT CTGGACAAGG ATGTCCTCGA CACGGTCTTC
ACGCGCTTCA AGGAGTTGGC CGACCGCAAG GCGGAAATCT TCGATGAGGA TCTGCAGGCC
CTCGTCAACG AGGATCTGCA GGAGGAGCAG GCGGAACGCT ATCGCCTGGG TTACCTGCGT
GTCTGCTCGG AGATGGGCAC CCATCCCGAA GCCCGGGTGG AAGTCCTGGT GGAAGGCGTG
GCCAAGACCG CCGCGGCCGT GGGCGGAGGG CCGGTAGATG CCGCCTTCAA GGCCATCGAA
GCGGTGGTGG CAAGCGGTGT GCAGTTATTG CTGTATTCGG TCAATGCCAT CACGACCGGC
ACCGACGCCC AAGGGGAGGT CACGGTGCGC TTGCAGCAGG ATGGCCGCAT CGTCAATGGT
CAGGGGGCGG ATACGGACAT CGTCCTCGCC AGCGCCAAGG CCTATCTCTC GGCCTTGAAC
CGCCTGCAAC AGCCCCAAGG GCGGCGGCAT CCGCAGATCT AG
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| Protein sequence | MRPAKEHLII FDTTLRDGEQ SPGAAMTRDE KLRIAKALER LRVDVIEAGF PAASNGDFVA
VQAIAAAVKD SRICALARAR DEDIRRAGEA IAGAAAGRIH TFIATSPVHM QAKLRMSPDE
VLERAVAAVK LAREYCDDVE FSPEDAGRSE EDFLCRVIEA VIDAGARTIN IPDTVGYNLP
DRFGQLVANL RRRVPNADRA IFSVHCHNDL GLAVANSLSA VLHGARQVEC TINGLGERAG
NAALEEIVMA VRTRADVFSC DTRIDATQIV PTSKLVSTIT GFPIQPNKAI VGANAFAHES
GIHQDGVLKH RETYEIMRAE DVGWAANRMT LGKLSGRAAV RARLEALGIH LDKDVLDTVF
TRFKELADRK AEIFDEDLQA LVNEDLQEEQ AERYRLGYLR VCSEMGTHPE ARVEVLVEGV
AKTAAAVGGG PVDAAFKAIE AVVASGVQLL LYSVNAITTG TDAQGEVTVR LQQDGRIVNG
QGADTDIVLA SAKAYLSALN RLQQPQGRRH PQI
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