Gene Lferr_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2217 
Symbol 
ID6878208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2194883 
End bp2195584 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID642790075 
Productprotein of unknown function DUF208 
Protein accessionYP_002220627 
Protein GI198284306 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.674012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.357063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA AGCCCGCCAC GCCTCTGCAA ACCCCCGATG GCAGCCGACA TATCCTGCTG 
CACTCCTGCT GCGCCCCCTG CGCCGGACCC ATCATGGACG ATATCCGTGC TGCCAGCATC
GACTTCACCG TCCTGTTCTA CAATCCCAAC ATCCACCCCA TGGCGGAATA CGAACTGCGC
AAGGAAGAGA ATATCCGTTA CGCGGAAAAG CTCGGCGTAC CCTTCGTGGA CCTGGACTAC
GACAAGGACC GCTGGTTTGA ACGGGTCAAG GGCCTGGAAT GGGAACCGGA ACGGGGTGCG
CGTTGCACCG CCTGTTTCGA CATGCGTTTC GAGCGCTCCG CCCTCTATGC CAGAGAACAC
GGCTTCACGG TCTTTACCAG CACCCTGGGC ATCTCCCGCT GGAAGGACAT GGCCCAGATC
AACGCCTGCG GCGAACGGGC CGCCGCCCGC CATGGGGGCC TGCAGTACTG GACCTACAAC
TGGCGCAAGG GCGGCGGCAG TCAGCGCATG ATCGAGATTG CCAAAGAAGA AAGCTTCTAC
CAGCAGGAAT ATTGCGGCTG CGTCTATTCC CTGCGCGATT CCAACCGCCA CCGCATCGCC
CAGGGCCGCT CCAAGATCGT CCGCGGCGTC AAGTTTTACG GACGGGACGA AACGGCCGGC
GCGGTACCCC CAGAGGCCGC CACCGACATC AGCAAGCGGT AA
 
Protein sequence
MSKKPATPLQ TPDGSRHILL HSCCAPCAGP IMDDIRAASI DFTVLFYNPN IHPMAEYELR 
KEENIRYAEK LGVPFVDLDY DKDRWFERVK GLEWEPERGA RCTACFDMRF ERSALYAREH
GFTVFTSTLG ISRWKDMAQI NACGERAAAR HGGLQYWTYN WRKGGGSQRM IEIAKEESFY
QQEYCGCVYS LRDSNRHRIA QGRSKIVRGV KFYGRDETAG AVPPEAATDI SKR