Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2210 |
Symbol | |
ID | 6878201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2188108 |
End bp | 2190192 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642790068 |
Product | glycyl-tRNA synthetase, beta subunit |
Protein accession | YP_002220620 |
Protein GI | 198284299 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.237877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCGC CTGAAGATCT CCTGCTGGAA CTGGGTTGTG AAGAGTTGCC CGCGCGGGAA CAAATGCCCC TCCAGGACGC CGCGACCGGG ATCATAGGCC AACTGCTCGA TGCGGCAGGA TTGCAGTTTG GGAGCATTCA TGGCTATGTC ACGCCGCGAC GGCTCGCTCT CTGGATCAAA GACGTCTCCC GGCAGAGCCT GCCGCAGGAG ACCCTACGCC GCGGCCCCCT CGTGGCGCGC GCCCGTGATG CCCAGGGCAA GCCCACGGCG GCGGCGGAGG GCTTTGCCCG TTCGTGTGGG GTCAGCCTGG ACGACCTGCT CACCCTGGAG ACCGAAAAAG GCCCCGTCCT GGCCTGGCGA GAGGTCGGCA CGGCGCAGGA CAGCCATGCG CTGTTACCCG AGATCGCCAG CAGACTGGTC ACCAGTCTGC CCCTGCGCAA ACGCATGCGC TGGGGAGCTG GTTCTGACAG TTTCCTGCGT CCGGTACGTT GGCTTTTGCT GCGTCAGGGC GGTCAGGTGC TGGACTGGAA GATGTTCGGT CTGGATGCCG GCGGCGAGAG CTTCGGACAT CGCGTCCATC ATCCCCAGGC GGTGCGGATC AGCACGCCTG CCGGTTACGC CGGATCCCTG CTGCAGGCAA AGGTGATGGT GGATTTCGCC GAGCGCCGCG CGCACATTTC CGGTAAAATG GCCGCCCTGG CAGACGAAAT GGCCGTCACT CCGATCCTGC CGGAGGCCTT GCTGGACGAG ATCACCGGAC TCAACGAATG GCCGGTCGTT CTCGCTGGCA GCTTCGCCGC GGACTATCTG CGGGTGCCCG AGGAAGCGCT GATTACGGTC ATGATGCAGC ACCAGCGTTA TGTCCCCCTG CGCGGTCGGA ATGAGCGCCT GGTCCCCCAT TATCTGTTCG CGGCCAACCT CCACAGCCGG GATACGCAGG TCGTCATCGA TGGAAATAAC CGGGTACTGC GTGCCCGCCT CGCGGATGCT GCCTTCTTTT GGGATCAGGA TCGCCAGATC TCCCTGCAGA CACGACGGGC CGCACTCGCC GGGGTGCTGT TTCAGGACGG CCTCGGCAGC ATTTTGGATA AGACCGTGCG TCTGCAGGAG CTTGCCGCAG CCCTCTCACC GCAGTTCGCG GTGGATGCGG GTGACATGAA CCGCGCCGCG GCACTCTGCA AAAGTGATCT GCTCAGCGGT TTGGTGGGCG AGTTTCCGGA ACTGCAAGGC ATCATGGGCG GCCACTACGC CCGGCATGAC GGGGAAAACA ACCGTGTTGC CACAGCCATC GCCCAGCATT ACCTGCCCAG TGGGCGCGAT GACGAAATCC CGGCGGATGC GCACGGTCAG TGCTTGGCCA TCGCCGACAA GCTGGATACC CTCTGCGGTT TTTTTGCCAT CGGCAAAGTA CCTACCGGGG ACCGCGATCC CTTTGCCCTG CGCCGCGCGG CGCTGGGGGT GCTGCGGATC GTGCTGGATG CCGGAGTGCC CCTGAACCTG GATGAAGCGG TAACCCGCAC GCTGGCCGCT TATGGTGGTG CCTTCGCCAG GAATCGGACG GAGATTCGGA GCGCGATACT CGACTTTTTT CAGGATCGGA TGCGGGTCTA TTTCAGGGAG GAGGGCTTCC GCGCCGACCA GATCGCCGCC GTGCTCAGCC GCCAGCCCCA CGAGCCACTG GACGCACGCC AGCGTCTCGA AGCCCTCGCC CTTTTCCAGG CGGAGCATGC GGCGGCAGAT GCCCTCGCAG CGCTGATCAA ACGGATCAAC AATCTGTTAC GCAAAGAAGT GATCTCCGGC GACTGGCCCA TAGATCCCCA ATACTTTATG GACCCGGTAG AGAACACACT CTGGGACTAC TGGCAGGCCC TGGAGCAGCC CCTCCATGCG CAGCTTGCGG AACGTCGCTA TACCGCGGCC CTCGGGCTGC TCGCAGGCCT GCGCCCCGCT GTCGACCAAT TTTTTGATGG GGTCATGGTC CTGGCCGAAG ATCCGGTGCT GCGCCAGAAC CGCCTGGCGC TGCTGGCCAG GCTTCAGGAA GCGTTCCTGC GCATTGCCGA CTTCTCGCAG TTGCAGGGGG CCTGA
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Protein sequence | MSAPEDLLLE LGCEELPARE QMPLQDAATG IIGQLLDAAG LQFGSIHGYV TPRRLALWIK DVSRQSLPQE TLRRGPLVAR ARDAQGKPTA AAEGFARSCG VSLDDLLTLE TEKGPVLAWR EVGTAQDSHA LLPEIASRLV TSLPLRKRMR WGAGSDSFLR PVRWLLLRQG GQVLDWKMFG LDAGGESFGH RVHHPQAVRI STPAGYAGSL LQAKVMVDFA ERRAHISGKM AALADEMAVT PILPEALLDE ITGLNEWPVV LAGSFAADYL RVPEEALITV MMQHQRYVPL RGRNERLVPH YLFAANLHSR DTQVVIDGNN RVLRARLADA AFFWDQDRQI SLQTRRAALA GVLFQDGLGS ILDKTVRLQE LAAALSPQFA VDAGDMNRAA ALCKSDLLSG LVGEFPELQG IMGGHYARHD GENNRVATAI AQHYLPSGRD DEIPADAHGQ CLAIADKLDT LCGFFAIGKV PTGDRDPFAL RRAALGVLRI VLDAGVPLNL DEAVTRTLAA YGGAFARNRT EIRSAILDFF QDRMRVYFRE EGFRADQIAA VLSRQPHEPL DARQRLEALA LFQAEHAAAD ALAALIKRIN NLLRKEVISG DWPIDPQYFM DPVENTLWDY WQALEQPLHA QLAERRYTAA LGLLAGLRPA VDQFFDGVMV LAEDPVLRQN RLALLARLQE AFLRIADFSQ LQGA
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