Gene Lferr_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2202 
Symbol 
ID6878193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2181114 
End bp2182199 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID642790060 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_002220612 
Protein GI198284291 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000136827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.042221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC AGTTAGGTGC CTGGTTTCTG GCAGCCTTCA TGGGATGTGG TGTGACGGTA 
GCCAATGCCA GTGTCTATGC CTTGCCCGTC CGGGGTAATA TTGTCGGGGC GCTCGAGGCG
GTAACCACCC ACAGAGACGA TACCCTTCTC GACATCGGGC GTTTCTACGA CCTCGGTTAT
AATCAGGTAA CAGCGGCCAA CCCGGGTGTC AATCCCTGGC TTCCTGGCCA GGCCAGCAAG
GTGGTCATCC CCGCCGAGTA TATTTTACCG CCAAAGCCCT GGACCGGGAT CATCGTGGAT
ATTCCGGCGC GACGGATCTA CTATTTTCCG GTGAATGACC GAGTGGTATA CACCTATCCC
GTCGGTGTCT TTCTGCCAGG CTGGAAGGAG GCGTTGACGG ATACGCGGAT TATCGCCAAA
TTTAAAATGC CTGCGTGGAA TGTGCCCAAA AATATCCACG CGTGGTTCGA GAAGAAATTT
CACATGGATA TCCCCTGGTA TTGGCCACCC GGCCCTGAAA ACCCCATGGG TGAACTGGCG
ATGGAGACCG GACTCTCCGG TATTTTCATC CACGGTACCT ACCACCCCTG GGGAGTTGGC
ATGCGGGCCA GCCAGGGGTG TTTTCAGATG TTCCCGGAAA ACGTCGCACA ACTCTTCCCG
ATGGTTCCGG TGGGCACCCC GGTACGAATC ATCGATCAGC CCAACCTGGT GGGTGTGCGC
GACGGGCAGG TCTATCTGCA GTCATATAAA CCGATGCATG CCTACCACAA AAAGGGTATT
CCGGAGTTGC AGCGGGCCGT GGTGACGATC AAGTCTTTCA TGGAGCGGAA CCGGATCGAA
GAGCGTATCG ACTGGGGCAT GGTCCGGCGT ATTGTGACCG AGCATAACAC CGTGGCACTC
CCCATCGGGG TCGGCGCGCC GAGCTATGCA ACGCTATCTG CCGCGCTTCC CGCAACACCC
TACGCGTATG CTCCTTACGG CCCATCGGCG AATGGCGCCG CGGTGCCGCC GCCTTTACCT
CTGGCTAGTG CCGCGGATCA GGAACATCTG CATGTTCAGG TGACTTTCCC CGATCAGAAG
CCATAG
 
Protein sequence
MQKQLGAWFL AAFMGCGVTV ANASVYALPV RGNIVGALEA VTTHRDDTLL DIGRFYDLGY 
NQVTAANPGV NPWLPGQASK VVIPAEYILP PKPWTGIIVD IPARRIYYFP VNDRVVYTYP
VGVFLPGWKE ALTDTRIIAK FKMPAWNVPK NIHAWFEKKF HMDIPWYWPP GPENPMGELA
METGLSGIFI HGTYHPWGVG MRASQGCFQM FPENVAQLFP MVPVGTPVRI IDQPNLVGVR
DGQVYLQSYK PMHAYHKKGI PELQRAVVTI KSFMERNRIE ERIDWGMVRR IVTEHNTVAL
PIGVGAPSYA TLSAALPATP YAYAPYGPSA NGAAVPPPLP LASAADQEHL HVQVTFPDQK
P