Gene Lferr_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2201 
Symbol 
ID6878192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2180289 
End bp2181083 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID642790059 
Productprotein of unknown function DUF218 
Protein accessionYP_002220611 
Protein GI198284290 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0561041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0364927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTATA CCACGTTGTT GACCCTGGTT TCGGCGCTTC TGCAACCGCC GGGTGTCCTG 
TTCGTTCTCG CCGCCCTGGG CTGGCTGGCG GAAATCGTGG GTTGGCGCTA TCTGGGCCGG
GTGCTCATGC TCCTCGCGCT GGGCACACTC TATTTTTTCT CGACTGCGAT AGGCGCGCGG
CTTCTCCTGC TGCCCCTGGA AGATCGCTAC CCACCCTTGA CCAAGCCCCT GCACGGAGCC
GACACTCCCC AGGCGATTAT CGTGCTAGGG GGCGGAGAGG TCATGCAATC GCCGGGCTCC
AATCAGGAAA CGGCGAATGC ACGCACCCTC GTGCGCCTGC TGGCGGCAGC GCAACTCGCC
CGGCAAACCG GACTTCCCAT AATTCCCAGT GGGGGCGCCC CGCGTCTCGG CGCCCCGGCC
GAGGCGCTCA CCATGGAGTT CATCCTGCGC CAGGATCTGG GCGTACAAAG CACCATCTGG
CCGGAAACCC AGTCCTACAA TACGGCAGCC AACGCGACAG ACAGCGCGGC GATATTGGCC
GAACACCATG GCCACCAGGC CTACTTGGTA ACCTCCGCGC TGCATATGCC GCGGGCAGTC
GCATGGTTTC GCCGCGCCGG TGTGAAAGTG GTCCCCGTGC CCACCGACTA TCGTCTGGAC
CGGGTGAACG GACTCCGGCT GGAGAGTTGG CTGCCGCGCG CGATTTATCT CGAAATCAGC
AGCGAGGCGA GTCACGAGTA CCTCGGACTT CTTTGGCTCT GGATTCAGGA GCAGGGAGTC
GGGGGTGGCC ACTAG
 
Protein sequence
MRYTTLLTLV SALLQPPGVL FVLAALGWLA EIVGWRYLGR VLMLLALGTL YFFSTAIGAR 
LLLLPLEDRY PPLTKPLHGA DTPQAIIVLG GGEVMQSPGS NQETANARTL VRLLAAAQLA
RQTGLPIIPS GGAPRLGAPA EALTMEFILR QDLGVQSTIW PETQSYNTAA NATDSAAILA
EHHGHQAYLV TSALHMPRAV AWFRRAGVKV VPVPTDYRLD RVNGLRLESW LPRAIYLEIS
SEASHEYLGL LWLWIQEQGV GGGH